Detail information of GWHGAAZE016127


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006346599.11.71311E-73PREDICTED: uncharacterized protein LOC102580609 isoform X1 [Solanum tuberosum]
trEMBLtr|M1CSK8|M1CSK8_SOLTU6E-74Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400073740}
TAIR10AT4G22000.13E-38Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6975971069760102-
GWHAAZE00000004mRNA6975971069760102-
GWHAAZE00000004exon6975971069760102-
GWHAAZE00000004CDS6975971069760102-
Transcript Sequence

Network for GWHGAAZE016127

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0244


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf40.437
SRR3591706second leaf28.514
SRR3591707mature leaf28.994
SRR3591708Shoot apex51.804
SRR3591709Stem55.277
SRR3591710White floral bud36.175
SRR3591711White flower51.159
SRR3591712Green floral bud40.236
SRR3591713Yellow flower49.688
SRP173429 SRR8316895Juvenile bud stage 38.564
SRR8316896Juvenile bud stage 51.722
SRR8316897Juvenile bud stage 26.847
SRR8316894Third green stage 19.731
SRR8316900Third green stage 74.374
SRR8316901Third green stage 62.373
SRR8316898Complete white stage 20.611
SRR8316899Complete white stage 67.701
SRR8316903Complete white stage 35.227
SRR8316902Silver flowering stage30.526
SRR8316904Silver flowering stage37.581
SRR8316905Silver flowering stage18.947
SRR8316906Gold flowering stage 60.774
SRR8316907Gold flowering stage 64.201
SRR8316908Gold flowering stage 76.335
SRP132670SRR6706286Control90.070
SRR6706287Light intensity 50%85.492
SRR6706288Light intensity 20%87.673
CNP0000432CNS0095592Slightly white alabastrum(diploid) 175.616
CNS0095593Slightly white alabastrum(diploid) 279.236
CNS0095594Slightly white alabastrum(diploid) 378.606
CNS0095595Whole white alabastrum(diploid) 268.228
CNS0095596Whole white alabastrum(diploid) 371.513
CNS0095597Whole white alabastrum(diploid) 457.187
CNS0095598Silvery flower (diploied) 150.237
CNS0095599Silvery flower (diploied) 259.123
CNS0095600Silvery flower (diploied) 352.209
CNS0095601Golden flower (diploid) 151.753
CNS0095602Golden flower (diploid) 244.176
CNS0095603Golden flower (diploid) 349.778
CNS0095604Slightly white alabastrum(tetraploid) 166.807
CNS0095605Slightly white alabastrum(tetraploid) 275.639
CNS0095606Slightly white alabastrum(tetraploid) 383.167
CNS0095607Whole white alabastrum(tetraploid) 157.905
CNS0095608Whole white alabastrum(tetraploid) 254.067
CNS0095609Whole white alabastrum(tetraploid) 368.697
CNS0095610Silvery flower (tetraploid) 171.144
CNS0095611Silvery flower (tetraploid) 264.243
CNS0095612Silvery flower (tetraploid) 354.900
CNS0095613Golden flower (tetraploid) 155.661
CNS0095614Golden flower (tetraploid) 262.068
CNS0095615Golden flower (tetraploid) 343.798
CRA001975CRR073297Stem 138.854
CRR073298Stem 240.494
CRR073299Stem 334.629
CRR073300Leaf 142.983
CRR073301Leaf 246.437
CRR073302Leaf 342.514
CRR073303Juvenile bud 147.062
CRR073304Juvenile bud 246.463
CRR073305Juvenile bud 338.316
CRR073306Third green 127.719
CRR073307Third green 231.199
CRR073308Third green 326.623
CRR073309Second white 120.670
CRR073310Second white 221.487
CRR073311Second white 317.907
CRR073312Silver flowering 115.175
CRR073313Silver flowering 217.326
CRR073314Silver flowering 314.399
CRR073315Gold flowering 118.318
CRR073316Gold flowering 226.499
CRR073317Gold flowering 318.258
CRR073318Tawny withering 146.079
CRR073319Tawny withering 234.620
CRR073320Tawny withering 326.431