Detail information of GWHGAAZE016183


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP32728.11.26474E-11hypothetical protein JCGZ_12020 [Jatropha curcas]
Swissprottr|Q9LZM3|PPCS2_ARATH7E-11Phosphopantothenate--cysteine ligase 2
trEMBLtr|A0A067KCM3|A0A067KCM3_JATCU5E-12Uncharacterized protein {ECO:0000313|EMBL:KDP32728.1}
TAIR10AT5G02080.10.000000001DNA / pantothenate metabolism flavoprotein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7106954171069798+
GWHAAZE00000004mRNA7106954171069798+
GWHAAZE00000004exon7106954171069585+
GWHAAZE00000004exon7106967971069798+
GWHAAZE00000004CDS7106954171069585+
GWHAAZE00000004CDS7106967971069798+
Transcript Sequence

Network for GWHGAAZE016183

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01922PPCS, COAB Metabolic pathways map01100
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.775
SRR3591706second leaf30.054
SRR3591707mature leaf25.308
SRR3591708Shoot apex35.337
SRR3591709Stem43.410
SRR3591710White floral bud42.666
SRR3591711White flower48.813
SRR3591712Green floral bud40.465
SRR3591713Yellow flower33.544
SRP173429 SRR8316895Juvenile bud stage 34.618
SRR8316896Juvenile bud stage 36.180
SRR8316897Juvenile bud stage 13.028
SRR8316894Third green stage 16.708
SRR8316900Third green stage 43.425
SRR8316901Third green stage 40.023
SRR8316898Complete white stage 17.774
SRR8316899Complete white stage 71.893
SRR8316903Complete white stage 34.739
SRR8316902Silver flowering stage14.827
SRR8316904Silver flowering stage25.280
SRR8316905Silver flowering stage15.073
SRR8316906Gold flowering stage 58.990
SRR8316907Gold flowering stage 55.353
SRR8316908Gold flowering stage 70.783
SRP132670SRR6706286Control59.190
SRR6706287Light intensity 50%59.208
SRR6706288Light intensity 20%59.999
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.205
CNS0095593Slightly white alabastrum(diploid) 222.685
CNS0095594Slightly white alabastrum(diploid) 314.753
CNS0095595Whole white alabastrum(diploid) 223.145
CNS0095596Whole white alabastrum(diploid) 312.654
CNS0095597Whole white alabastrum(diploid) 415.567
CNS0095598Silvery flower (diploied) 135.352
CNS0095599Silvery flower (diploied) 229.637
CNS0095600Silvery flower (diploied) 340.326
CNS0095601Golden flower (diploid) 126.129
CNS0095602Golden flower (diploid) 240.974
CNS0095603Golden flower (diploid) 333.207
CNS0095604Slightly white alabastrum(tetraploid) 124.035
CNS0095605Slightly white alabastrum(tetraploid) 224.343
CNS0095606Slightly white alabastrum(tetraploid) 353.860
CNS0095607Whole white alabastrum(tetraploid) 112.356
CNS0095608Whole white alabastrum(tetraploid) 28.256
CNS0095609Whole white alabastrum(tetraploid) 339.599
CNS0095610Silvery flower (tetraploid) 153.330
CNS0095611Silvery flower (tetraploid) 235.331
CNS0095612Silvery flower (tetraploid) 338.702
CNS0095613Golden flower (tetraploid) 130.410
CNS0095614Golden flower (tetraploid) 252.247
CNS0095615Golden flower (tetraploid) 326.999
CRA001975CRR073297Stem 133.182
CRR073298Stem 228.440
CRR073299Stem 333.604
CRR073300Leaf 128.998
CRR073301Leaf 227.474
CRR073302Leaf 328.847
CRR073303Juvenile bud 133.476
CRR073304Juvenile bud 219.492
CRR073305Juvenile bud 328.873
CRR073306Third green 112.223
CRR073307Third green 212.367
CRR073308Third green 315.036
CRR073309Second white 112.276
CRR073310Second white 210.099
CRR073311Second white 38.469
CRR073312Silver flowering 17.734
CRR073313Silver flowering 24.412
CRR073314Silver flowering 36.320
CRR073315Gold flowering 111.516
CRR073316Gold flowering 216.312
CRR073317Gold flowering 316.525
CRR073318Tawny withering 136.439
CRR073319Tawny withering 232.098
CRR073320Tawny withering 332.323