Detail information of GWHGAAZE016249


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007018816.10Endoplasmic reticulum vesicle transporter protein isoform 1 [Theobroma cacao]
Swissprottr|Q69SA9|PDI54_ORYSJ4E-17Protein disulfide isomerase-like 5-4 (Precursor)
trEMBLtr|A0A061FG49|A0A061FG49_THECC0Endoplasmic reticulum vesicle transporter protein isoform 1 {ECO:0000313|EMBL:EOY16041.1}
TAIR10AT1G36050.12E-168Endoplasmic reticulum vesicle transporter protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7213099272141526-
GWHAAZE00000004mRNA7213099272141526-
GWHAAZE00000004exon7214138572141526-
GWHAAZE00000004exon7213829572138368-
GWHAAZE00000004exon7213795172138034-
GWHAAZE00000004exon7213700072137080-
GWHAAZE00000004exon7213661372136693-
GWHAAZE00000004exon7213587972135971-
GWHAAZE00000004exon7213357972133758-
GWHAAZE00000004exon7213342872133495-
GWHAAZE00000004exon7213325572133306-
GWHAAZE00000004exon7213214272132195-
GWHAAZE00000004exon7213195972132051-
GWHAAZE00000004exon7213099272131018-
GWHAAZE00000004CDS7214138572141526-
GWHAAZE00000004CDS7213829572138368-
GWHAAZE00000004CDS7213795172138034-
GWHAAZE00000004CDS7213700072137080-
GWHAAZE00000004CDS7213661372136693-
GWHAAZE00000004CDS7213587972135971-
GWHAAZE00000004CDS7213357972133758-
GWHAAZE00000004CDS7213342872133495-
GWHAAZE00000004CDS7213325572133306-
GWHAAZE00000004CDS7213214272132195-
GWHAAZE00000004CDS7213195972132051-
GWHAAZE00000004CDS7213099272131018-
Transcript Sequence

Network for GWHGAAZE016249

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0279


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13850.7ERGIC_N8971.20E-31
PF07970.13COPIIcoated_ERV1493353.20E-72
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.700
SRR3591706second leaf10.791
SRR3591707mature leaf12.007
SRR3591708Shoot apex17.757
SRR3591709Stem28.395
SRR3591710White floral bud32.644
SRR3591711White flower20.785
SRR3591712Green floral bud38.351
SRR3591713Yellow flower19.981
SRP173429 SRR8316895Juvenile bud stage 14.348
SRR8316896Juvenile bud stage 23.978
SRR8316897Juvenile bud stage 14.672
SRR8316894Third green stage 11.581
SRR8316900Third green stage 40.152
SRR8316901Third green stage 32.761
SRR8316898Complete white stage 12.126
SRR8316899Complete white stage 33.490
SRR8316903Complete white stage 15.730
SRR8316902Silver flowering stage9.621
SRR8316904Silver flowering stage15.560
SRR8316905Silver flowering stage6.338
SRR8316906Gold flowering stage 25.593
SRR8316907Gold flowering stage 21.541
SRR8316908Gold flowering stage 35.240
SRP132670SRR6706286Control13.669
SRR6706287Light intensity 50%15.884
SRR6706288Light intensity 20%17.023
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.146
CNS0095593Slightly white alabastrum(diploid) 224.723
CNS0095594Slightly white alabastrum(diploid) 332.755
CNS0095595Whole white alabastrum(diploid) 239.291
CNS0095596Whole white alabastrum(diploid) 347.732
CNS0095597Whole white alabastrum(diploid) 446.309
CNS0095598Silvery flower (diploied) 18.353
CNS0095599Silvery flower (diploied) 29.628
CNS0095600Silvery flower (diploied) 327.477
CNS0095601Golden flower (diploid) 112.872
CNS0095602Golden flower (diploid) 222.183
CNS0095603Golden flower (diploid) 321.165
CNS0095604Slightly white alabastrum(tetraploid) 146.299
CNS0095605Slightly white alabastrum(tetraploid) 248.606
CNS0095606Slightly white alabastrum(tetraploid) 331.229
CNS0095607Whole white alabastrum(tetraploid) 156.906
CNS0095608Whole white alabastrum(tetraploid) 262.230
CNS0095609Whole white alabastrum(tetraploid) 345.730
CNS0095610Silvery flower (tetraploid) 137.720
CNS0095611Silvery flower (tetraploid) 234.949
CNS0095612Silvery flower (tetraploid) 333.281
CNS0095613Golden flower (tetraploid) 116.576
CNS0095614Golden flower (tetraploid) 226.760
CNS0095615Golden flower (tetraploid) 323.812
CRA001975CRR073297Stem 125.716
CRR073298Stem 222.545
CRR073299Stem 316.300
CRR073300Leaf 134.363
CRR073301Leaf 226.528
CRR073302Leaf 327.023
CRR073303Juvenile bud 131.682
CRR073304Juvenile bud 229.880
CRR073305Juvenile bud 317.112
CRR073306Third green 111.416
CRR073307Third green 212.692
CRR073308Third green 38.907
CRR073309Second white 115.349
CRR073310Second white 216.860
CRR073311Second white 312.962
CRR073312Silver flowering 111.049
CRR073313Silver flowering 210.565
CRR073314Silver flowering 38.594
CRR073315Gold flowering 110.957
CRR073316Gold flowering 213.645
CRR073317Gold flowering 38.335
CRR073318Tawny withering 122.521
CRR073319Tawny withering 218.824
CRR073320Tawny withering 320.501