Gene detail

Detail information of GWHGAAZE016305

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP41444.1	1.9342E-176	hypothetical protein JCGZ_15851 [Jatropha curcas]
Swissprot	tr\|P38025\|PUR7_ARATH	4E-151	Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (Precursor)
trEMBL	tr\|A0A067LBE9\|A0A067LBE9_JATCU	7E-177	Uncharacterized protein {ECO:0000313\|EMBL:KDP41444.1}
TAIR10	AT3G21110.2	3E-123	purin 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	73235790	73242252	-
GWHAAZE00000004	mRNA	73235790	73242252	-
GWHAAZE00000004	exon	73241953	73242252	-
GWHAAZE00000004	exon	73241661	73241735	-
GWHAAZE00000004	exon	73240780	73240881	-
GWHAAZE00000004	exon	73240487	73240526	-
GWHAAZE00000004	exon	73240186	73240251	-
GWHAAZE00000004	exon	73239799	73239891	-
GWHAAZE00000004	exon	73239340	73239449	-
GWHAAZE00000004	exon	73238377	73238457	-
GWHAAZE00000004	exon	73237801	73237890	-
GWHAAZE00000004	exon	73237429	73237479	-
GWHAAZE00000004	exon	73237277	73237323	-
GWHAAZE00000004	exon	73236462	73236519	-
GWHAAZE00000004	exon	73236011	73236066	-
GWHAAZE00000004	exon	73235790	73235844	-
GWHAAZE00000004	CDS	73241953	73242252	-
GWHAAZE00000004	CDS	73241661	73241735	-
GWHAAZE00000004	CDS	73240780	73240881	-
GWHAAZE00000004	CDS	73240487	73240526	-
GWHAAZE00000004	CDS	73240186	73240251	-
GWHAAZE00000004	CDS	73239799	73239891	-
GWHAAZE00000004	CDS	73239340	73239449	-
GWHAAZE00000004	CDS	73238377	73238457	-
GWHAAZE00000004	CDS	73237801	73237890	-
GWHAAZE00000004	CDS	73237429	73237479	-
GWHAAZE00000004	CDS	73237277	73237323	-
GWHAAZE00000004	CDS	73236462	73236519	-
GWHAAZE00000004	CDS	73236011	73236066	-
GWHAAZE00000004	CDS	73235790	73235844	-

Transcript Sequence
>GWHTAAZE016325 ATGGCTCAGTGTATGTTAAGCTTAAACCCTACAAAAACCCTAACTTTGAAGCTCTCATCATCAATCAACCAATCCCCCTTCAATCCAACAACCCAAAAATTGCCTACATTACCATCAAAATCCATGAAGAAGAATTTCATATCTATCTCTGCATCAAAATCACTCTCTCTTGATGCTTTAACCAACAGTGAAAGAAGGGACCAAGTGATGATTGCTCTTAAAGATTCTCTTTCTAATTGTTTATCCGAAACTAATCTTCATCTTACTGTTCCTGGTCTCAAATCCAAAACTAGAGGCAAGGCGGATAATCACAACTTTTCATGGCCGTTGCTATTGCTAGAGCAGAAATCAAAATCCCACTACTTTGAGTCAAAAGTCAGAGATATATATGATGGTGGGGATTATCTTGTTCTAGTCACAACAGATAGGCAAAGTGCATTTGATAGAATTCTTGCTTCAATTCCCTTCAAAGGCCAGGATTCAGAGGCCAATCTTCCATATTATACTGATTTGCATTTTTCAGCGCCGGATAAAAATGTTACAATAGCAAAGAAATGCTCAGTTTTTCCTGTTGAATTTGTTGTTAGAGGCTATGTAACTGGAAGTACTGATACATCACTATGGACGGTCTACAAGAATGGTGTCCGAAATTACTGTGGCAATGTCCTTCCTGATGGCTTGGTAAAAAACCAAAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCGGATCATGATGTTCCTGTAACTCCGAGGAGGTTTGCTTTTAGTATTAGCTTTATAGTCAAAAGTGGGCTGATGAGTCAAGTTGATTATGATGAAGTGAGTAGGAAAGCATTGAGCTTATTCGAGTATGGGCAGGTGCATACGCCTGACTCGAGCAGATATTGGATGGCCCATTCTTACGAGGAACGCATCGAGAATGGTCTTGAACCTGAAAATGTTGACAAGGAGTTTTTGAGGTTGTGGTTCAAAGATCACTGTAATCCGTACGAGGATGAGGTCCTCCCTGATGCTCCGGAAGAACTTGTGTCCGAATTGGCCTGGCGGTACATTTTCTTGTTTGAGACAATAACAAAATCAAAATTTACAATACCAGACACAAAGGAACCTATACATGATCGAATCTCTCGTAACGTCTCATTAGCACTGTCATCTCTACGGCTCACTGTATTGGGTGAAATTGGTGCACAGCCATTTTTTCCAAATTTTGCATAG

Network for GWHGAAZE016305

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01259.19	SAICAR_synt	123	288	1.00E-25
PF01259.19	SAICAR_synt	289	336	1.80E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01923	purC	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230

Gene Ontology

GO term	Ontology	Name
GO:0006164	biological_process	purine nucleotide biosynthetic process
GO:0004639	molecular_function	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.689
	SRR3591706	second leaf	2.418
	SRR3591707	mature leaf	4.587
	SRR3591708	Shoot apex	9.996
	SRR3591709	Stem	9.381
	SRR3591710	White floral bud	6.814
	SRR3591711	White flower	11.828
	SRR3591712	Green floral bud	12.447
	SRR3591713	Yellow flower	7.213
SRP173429	SRR8316895	Juvenile bud stage	7.524
	SRR8316896	Juvenile bud stage	10.101
	SRR8316897	Juvenile bud stage	4.318
	SRR8316894	Third green stage	3.561
	SRR8316900	Third green stage	11.292
	SRR8316901	Third green stage	6.942
	SRR8316898	Complete white stage	0.795
	SRR8316899	Complete white stage	6.751
	SRR8316903	Complete white stage	1.760
	SRR8316902	Silver flowering stage	1.710
	SRR8316904	Silver flowering stage	2.131
	SRR8316905	Silver flowering stage	0.985
	SRR8316906	Gold flowering stage	3.420
	SRR8316907	Gold flowering stage	2.762
	SRR8316908	Gold flowering stage	3.920
SRP132670	SRR6706286	Control	2.506
	SRR6706287	Light intensity 50%	2.869
	SRR6706288	Light intensity 20%	3.708
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.012
	CNS0095593	Slightly white alabastrum(diploid) 2	11.322
	CNS0095594	Slightly white alabastrum(diploid) 3	8.362
	CNS0095595	Whole white alabastrum(diploid) 2	10.093
	CNS0095596	Whole white alabastrum(diploid) 3	9.875
	CNS0095597	Whole white alabastrum(diploid) 4	5.565
	CNS0095598	Silvery flower (diploied) 1	7.638
	CNS0095599	Silvery flower (diploied) 2	6.192
	CNS0095600	Silvery flower (diploied) 3	4.377
	CNS0095601	Golden flower (diploid) 1	3.495
	CNS0095602	Golden flower (diploid) 2	3.292
	CNS0095603	Golden flower (diploid) 3	3.362
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.894
	CNS0095605	Slightly white alabastrum(tetraploid) 2	10.036
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.824
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.455
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.227
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.603
	CNS0095610	Silvery flower (tetraploid) 1	10.861
	CNS0095611	Silvery flower (tetraploid) 2	8.256
	CNS0095612	Silvery flower (tetraploid) 3	4.257
	CNS0095613	Golden flower (tetraploid) 1	3.008
	CNS0095614	Golden flower (tetraploid) 2	5.170
	CNS0095615	Golden flower (tetraploid) 3	0.958
CRA001975	CRR073297	Stem 1	5.667
	CRR073298	Stem 2	5.749
	CRR073299	Stem 3	6.663
	CRR073300	Leaf 1	5.293
	CRR073301	Leaf 2	6.239
	CRR073302	Leaf 3	3.364
	CRR073303	Juvenile bud 1	6.935
	CRR073304	Juvenile bud 2	2.214
	CRR073305	Juvenile bud 3	4.660
	CRR073306	Third green 1	0.376
	CRR073307	Third green 2	0.343
	CRR073308	Third green 3	0.359
	CRR073309	Second white 1	1.071
	CRR073310	Second white 2	0.476
	CRR073311	Second white 3	0.489
	CRR073312	Silver flowering 1	0.662
	CRR073313	Silver flowering 2	0.907
	CRR073314	Silver flowering 3	0.254
	CRR073315	Gold flowering 1	10.843
	CRR073316	Gold flowering 2	11.789
	CRR073317	Gold flowering 3	4.700
	CRR073318	Tawny withering 1	7.932
	CRR073319	Tawny withering 2	13.183
	CRR073320	Tawny withering 3	10.426