Detail information of GWHGAAZE016311


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007137640.11.49932E-08hypothetical protein PHAVU_009G143400g [Phaseolus vulgaris]
Swissprottr|Q96451|1433B_SOYBN3E-1014-3-3-like protein B (Fragment)
trEMBLtr|M0RJJ2|M0RJJ2_MUSAM0.000000002Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19170_001}
TAIR10AT5G65430.10.00000009general regulatory factor 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7341191073412187-
GWHAAZE00000004mRNA7341191073412187-
GWHAAZE00000004exon7341191073412041-
GWHAAZE00000004exon7341214673412187-
GWHAAZE00000004CDS7341214673412187-
GWHAAZE00000004CDS7341191073412041-
Transcript Sequence

Network for GWHGAAZE016311

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/321532.70E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.349
SRR3591707mature leaf0.355
SRR3591708Shoot apex1.365
SRR3591709Stem0.220
SRR3591710White floral bud0.618
SRR3591711White flower0.021
SRR3591712Green floral bud0.056
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.410
SRR8316896Juvenile bud stage 0.529
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.313
SRR8316900Third green stage 1.941
SRR8316901Third green stage 1.429
SRR8316898Complete white stage 1.356
SRR8316899Complete white stage 7.084
SRR8316903Complete white stage 3.254
SRR8316902Silver flowering stage1.262
SRR8316904Silver flowering stage1.147
SRR8316905Silver flowering stage0.447
SRR8316906Gold flowering stage 1.244
SRR8316907Gold flowering stage 1.473
SRR8316908Gold flowering stage 0.555
SRP132670SRR6706286Control2.862
SRR6706287Light intensity 50%3.110
SRR6706288Light intensity 20%4.017
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.037
CNS0095593Slightly white alabastrum(diploid) 20.931
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 21.012
CNS0095596Whole white alabastrum(diploid) 31.070
CNS0095597Whole white alabastrum(diploid) 40.585
CNS0095598Silvery flower (diploied) 10.842
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.610
CNS0095601Golden flower (diploid) 10.413
CNS0095602Golden flower (diploid) 21.013
CNS0095603Golden flower (diploid) 30.848
CNS0095604Slightly white alabastrum(tetraploid) 10.687
CNS0095605Slightly white alabastrum(tetraploid) 20.160
CNS0095606Slightly white alabastrum(tetraploid) 31.963
CNS0095607Whole white alabastrum(tetraploid) 10.776
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 31.573
CNS0095610Silvery flower (tetraploid) 10.526
CNS0095611Silvery flower (tetraploid) 20.619
CNS0095612Silvery flower (tetraploid) 30.148
CNS0095613Golden flower (tetraploid) 10.375
CNS0095614Golden flower (tetraploid) 20.610
CNS0095615Golden flower (tetraploid) 30.957
CRA001975CRR073297Stem 11.726
CRR073298Stem 22.026
CRR073299Stem 33.095
CRR073300Leaf 13.122
CRR073301Leaf 22.928
CRR073302Leaf 31.458
CRR073303Juvenile bud 16.736
CRR073304Juvenile bud 20.286
CRR073305Juvenile bud 34.499
CRR073306Third green 10.601
CRR073307Third green 21.167
CRR073308Third green 30.987
CRR073309Second white 10.000
CRR073310Second white 20.756
CRR073311Second white 31.248
CRR073312Silver flowering 10.728
CRR073313Silver flowering 20.471
CRR073314Silver flowering 30.132
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.358
CRR073317Gold flowering 30.204
CRR073318Tawny withering 12.488
CRR073319Tawny withering 20.658
CRR073320Tawny withering 30.495