Gene detail

Detail information of GWHGAAZE016362

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011100978.1	0	PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like isoform X1 [Sesamum indicum]
Swissprot	tr\|Q9SUG3\|ITPK2_ARATH	8E-173	Inositol-tetrakisphosphate 1-kinase 2
trEMBL	tr\|A0A061FM83\|A0A061FM83_THECC	0	Inositol-tetrakisphosphate 1-kinase {ECO:0000256\|PIRNR:PIRNR038186}
TAIR10	AT4G08170.2	4E-121	Inositol 1,3,4-trisphosphate 5/6-kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	74815208	74822824	+
GWHAAZE00000004	mRNA	74815208	74822824	+
GWHAAZE00000004	exon	74815208	74815398	+
GWHAAZE00000004	exon	74816578	74816659	+
GWHAAZE00000004	exon	74816987	74817019	+
GWHAAZE00000004	exon	74818218	74818377	+
GWHAAZE00000004	exon	74818566	74818658	+
GWHAAZE00000004	exon	74819426	74819533	+
GWHAAZE00000004	exon	74819631	74819807	+
GWHAAZE00000004	exon	74820216	74820271	+
GWHAAZE00000004	exon	74820389	74820473	+
GWHAAZE00000004	exon	74821718	74821808	+
GWHAAZE00000004	exon	74822509	74822824	+
GWHAAZE00000004	CDS	74815208	74815398	+
GWHAAZE00000004	CDS	74816578	74816659	+
GWHAAZE00000004	CDS	74816987	74817019	+
GWHAAZE00000004	CDS	74818218	74818377	+
GWHAAZE00000004	CDS	74818566	74818658	+
GWHAAZE00000004	CDS	74819426	74819533	+
GWHAAZE00000004	CDS	74819631	74819807	+
GWHAAZE00000004	CDS	74820216	74820271	+
GWHAAZE00000004	CDS	74820389	74820473	+
GWHAAZE00000004	CDS	74821718	74821808	+
GWHAAZE00000004	CDS	74822509	74822824	+

Transcript Sequence
>GWHTAAZE016382 ATGAGGTTGAAGGAGGATAATAATATGAAGGAAGTGGAGAGAGAGGAAGAAGAGATGATGGATTCGCCGACGACGATTTCGATCGGAGGAGGAGGGTTACCACAAAACATGAACGTTGTGGTTGTTGGTTATGCCCTTACTTCTAAGAAGATTAAGAGCTTTCTTCAGCCCAAACTTGAAGGTTTGGCCAGGAATAAGGGGATATTGTTTGTTGCTATTGACCAAACCAAGCCACTTTCAGATCAGGGTCCTTTTGACATTGTGTTGCATAAGTTATCAGGAAAAGAATGGGGGCAACTTCTTGAGTCTCTCTCTCTCTCTCATACTCTTTCTTCTCTGCTAAAGGATTACCGAGAAACGCATCCAGAGGTAACAGTACTTGATCCACCAGATGCCATAAAGCATGTATACAATCGACAGTCCATGCTACAAGATGTTGCTGATCTGAACTTGTGTGATGTACATGGCACTGTTGGGGTTCCCAGACAATTGGTGATTAAAAAAGATCCTTCTTCTATCCCCGATGCAGTTACCAAAGCTGGGTTGATTCTACCTCTTGTGGCGAAGCCTTTAGTTGCAAAATCACACGAACTATCCCTTGCTTATGATCAGTACTCTCTCAAGAAGTTAGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCACGGAGGTGTTCTCTTCAAGGTTTATATCGTTGGGGAAGCAATTAAGGTAGTACGCCGTTTCTCTTTACCTGATGTTAGTAAGCGTGATCTGTCCAGAAGTGCTGGTGTATACCGCTTTCCAAGGGTTTCTTGTGCTGCGGCATCGGCTGATGATGCAGATCTTGACCCATGTATTGCTGAACTTCCTCCTCGGCCTTTACTCGAAAGATTAGCAAGGGAACTTCGTCGTCGACTGGGTCTTCGGCTATTCAACTTGGATATGATTCGAGAGCATGGTACCCGAGATCGCTTTTATGTCATTGACATAAACTATTTTCCTGGGTATGGGAAAATGCCAGAATACGAGCATATATTTACGGATTTTCTTCTGAACCTGGCTCAATCCAAGTACCATAAGCGCTCTGTCAGTATCTCACTAATAAACAAGCTTAAAGTGAGGCAATCCAAATCATATATACGGATTGGATCTTTAGAAACCATTTCTAAGGGTCCTCTTTCGCTTTCCAATTTTGAGTCTCAAGTTGATGGAAAGCACCCATTGCCCTATGGCTTGGGACAAATACATGTTCAACTCATTATGCCGGGGGAAAAAGAAAGATTGAAAGTGGGAGGTTACTCTCGTCTTGCCTGTGTCTATGAGAAAACCACTCCCCATAAACAAGCGTCAAACTATTATGTCCTGGATTCCGGGATTCATTTTGGTCCGGATCCTCCAAGCACATTCTAA

Network for GWHGAAZE016362

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF17927.2	Ins134_P3_kin_N	41	133	8.10E-33
PF05770.12	Ins134_P3_kin	155	345	1.20E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00913	ITPK1	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	18.662
	SRR3591706	second leaf	49.775
	SRR3591707	mature leaf	136.127
	SRR3591708	Shoot apex	18.836
	SRR3591709	Stem	27.695
	SRR3591710	White floral bud	42.582
	SRR3591711	White flower	35.737
	SRR3591712	Green floral bud	72.460
	SRR3591713	Yellow flower	67.998
SRP173429	SRR8316895	Juvenile bud stage	17.644
	SRR8316896	Juvenile bud stage	30.304
	SRR8316897	Juvenile bud stage	15.901
	SRR8316894	Third green stage	15.265
	SRR8316900	Third green stage	69.188
	SRR8316901	Third green stage	73.141
	SRR8316898	Complete white stage	21.241
	SRR8316899	Complete white stage	88.708
	SRR8316903	Complete white stage	30.715
	SRR8316902	Silver flowering stage	24.686
	SRR8316904	Silver flowering stage	27.334
	SRR8316905	Silver flowering stage	12.635
	SRR8316906	Gold flowering stage	54.347
	SRR8316907	Gold flowering stage	48.184
	SRR8316908	Gold flowering stage	42.516
SRP132670	SRR6706286	Control	36.968
	SRR6706287	Light intensity 50%	43.373
	SRR6706288	Light intensity 20%	41.130
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.721
	CNS0095593	Slightly white alabastrum(diploid) 2	34.224
	CNS0095594	Slightly white alabastrum(diploid) 3	34.800
	CNS0095595	Whole white alabastrum(diploid) 2	47.821
	CNS0095596	Whole white alabastrum(diploid) 3	53.246
	CNS0095597	Whole white alabastrum(diploid) 4	61.450
	CNS0095598	Silvery flower (diploied) 1	29.126
	CNS0095599	Silvery flower (diploied) 2	25.298
	CNS0095600	Silvery flower (diploied) 3	44.327
	CNS0095601	Golden flower (diploid) 1	26.815
	CNS0095602	Golden flower (diploid) 2	61.189
	CNS0095603	Golden flower (diploid) 3	55.867
	CNS0095604	Slightly white alabastrum(tetraploid) 1	59.006
	CNS0095605	Slightly white alabastrum(tetraploid) 2	52.272
	CNS0095606	Slightly white alabastrum(tetraploid) 3	37.673
	CNS0095607	Whole white alabastrum(tetraploid) 1	77.072
	CNS0095608	Whole white alabastrum(tetraploid) 2	87.109
	CNS0095609	Whole white alabastrum(tetraploid) 3	75.987
	CNS0095610	Silvery flower (tetraploid) 1	37.204
	CNS0095611	Silvery flower (tetraploid) 2	36.412
	CNS0095612	Silvery flower (tetraploid) 3	25.430
	CNS0095613	Golden flower (tetraploid) 1	34.009
	CNS0095614	Golden flower (tetraploid) 2	37.840
	CNS0095615	Golden flower (tetraploid) 3	116.594
CRA001975	CRR073297	Stem 1	22.797
	CRR073298	Stem 2	21.948
	CRR073299	Stem 3	13.866
	CRR073300	Leaf 1	46.556
	CRR073301	Leaf 2	44.688
	CRR073302	Leaf 3	31.898
	CRR073303	Juvenile bud 1	43.933
	CRR073304	Juvenile bud 2	27.491
	CRR073305	Juvenile bud 3	36.122
	CRR073306	Third green 1	17.876
	CRR073307	Third green 2	19.995
	CRR073308	Third green 3	18.143
	CRR073309	Second white 1	15.812
	CRR073310	Second white 2	21.007
	CRR073311	Second white 3	19.223
	CRR073312	Silver flowering 1	36.042
	CRR073313	Silver flowering 2	34.636
	CRR073314	Silver flowering 3	43.672
	CRR073315	Gold flowering 1	11.220
	CRR073316	Gold flowering 2	12.665
	CRR073317	Gold flowering 3	5.957
	CRR073318	Tawny withering 1	20.718
	CRR073319	Tawny withering 2	28.636
	CRR073320	Tawny withering 3	23.669