Detail information of GWHGAAZE016482


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008220342.10PREDICTED: phosphatidate phosphatase PAH2 [Prunus mume]
Swissprottr|Q9FMN2|PAH2_ARATH3E-171Phosphatidate phosphatase PAH2
trEMBLtr|M5XMH1|M5XMH1_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ26696.1}
TAIR10AT5G42870.12E-118phosphatidic acid phosphohydrolase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7744564177453741-
GWHAAZE00000004mRNA7744564177453741-
GWHAAZE00000004exon7744564177445745-
GWHAAZE00000004exon7744585277445980-
GWHAAZE00000004exon7744685377446896-
GWHAAZE00000004exon7744771777447789-
GWHAAZE00000004exon7744799777448083-
GWHAAZE00000004exon7744825677448340-
GWHAAZE00000004exon7744993677450009-
GWHAAZE00000004exon7745009977450487-
GWHAAZE00000004exon7745193577453741-
GWHAAZE00000004CDS7745193577453741-
GWHAAZE00000004CDS7745009977450487-
GWHAAZE00000004CDS7744993677450009-
GWHAAZE00000004CDS7744825677448340-
GWHAAZE00000004CDS7744799777448083-
GWHAAZE00000004CDS7744771777447789-
GWHAAZE00000004CDS7744685377446896-
GWHAAZE00000004CDS7744585277445980-
GWHAAZE00000004CDS7744564177445745-
Transcript Sequence

Network for GWHGAAZE016482

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04571.15Lipin_N13977.80E-26
PF08235.14LNS27019223.10E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15728LPIN Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564
mTOR signaling pathwaymap04150

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.830
SRR3591706second leaf12.572
SRR3591707mature leaf13.132
SRR3591708Shoot apex12.683
SRR3591709Stem14.885
SRR3591710White floral bud31.886
SRR3591711White flower17.885
SRR3591712Green floral bud28.045
SRR3591713Yellow flower17.241
SRP173429 SRR8316895Juvenile bud stage 12.210
SRR8316896Juvenile bud stage 18.161
SRR8316897Juvenile bud stage 7.322
SRR8316894Third green stage 8.610
SRR8316900Third green stage 26.176
SRR8316901Third green stage 22.731
SRR8316898Complete white stage 4.991
SRR8316899Complete white stage 18.693
SRR8316903Complete white stage 12.401
SRR8316902Silver flowering stage8.488
SRR8316904Silver flowering stage13.415
SRR8316905Silver flowering stage6.569
SRR8316906Gold flowering stage 21.029
SRR8316907Gold flowering stage 18.167
SRR8316908Gold flowering stage 18.506
SRP132670SRR6706286Control13.761
SRR6706287Light intensity 50%13.842
SRR6706288Light intensity 20%13.962
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.844
CNS0095593Slightly white alabastrum(diploid) 210.904
CNS0095594Slightly white alabastrum(diploid) 310.896
CNS0095595Whole white alabastrum(diploid) 223.773
CNS0095596Whole white alabastrum(diploid) 324.415
CNS0095597Whole white alabastrum(diploid) 434.297
CNS0095598Silvery flower (diploied) 118.460
CNS0095599Silvery flower (diploied) 221.124
CNS0095600Silvery flower (diploied) 325.090
CNS0095601Golden flower (diploid) 123.680
CNS0095602Golden flower (diploid) 228.792
CNS0095603Golden flower (diploid) 327.258
CNS0095604Slightly white alabastrum(tetraploid) 120.307
CNS0095605Slightly white alabastrum(tetraploid) 219.540
CNS0095606Slightly white alabastrum(tetraploid) 319.358
CNS0095607Whole white alabastrum(tetraploid) 131.157
CNS0095608Whole white alabastrum(tetraploid) 242.667
CNS0095609Whole white alabastrum(tetraploid) 329.324
CNS0095610Silvery flower (tetraploid) 116.114
CNS0095611Silvery flower (tetraploid) 218.552
CNS0095612Silvery flower (tetraploid) 318.945
CNS0095613Golden flower (tetraploid) 110.783
CNS0095614Golden flower (tetraploid) 214.852
CNS0095615Golden flower (tetraploid) 322.110
CRA001975CRR073297Stem 111.213
CRR073298Stem 211.932
CRR073299Stem 35.940
CRR073300Leaf 118.592
CRR073301Leaf 212.431
CRR073302Leaf 38.918
CRR073303Juvenile bud 112.814
CRR073304Juvenile bud 27.863
CRR073305Juvenile bud 37.041
CRR073306Third green 15.096
CRR073307Third green 23.880
CRR073308Third green 35.318
CRR073309Second white 11.278
CRR073310Second white 24.803
CRR073311Second white 34.739
CRR073312Silver flowering 15.504
CRR073313Silver flowering 24.238
CRR073314Silver flowering 33.983
CRR073315Gold flowering 17.036
CRR073316Gold flowering 27.976
CRR073317Gold flowering 33.651
CRR073318Tawny withering 18.839
CRR073319Tawny withering 27.715
CRR073320Tawny withering 36.993