Detail information of GWHGAAZE016537


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010254930.10PREDICTED: lysophospholipid acyltransferase LPEAT1 isoform X1 [Nelumbo nucifera]
Swissprottr|Q8L7R3|LPCT1_ARATH2E-177Lysophospholipid acyltransferase LPEAT1
trEMBLtr|M5XD55|M5XD55_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ24042.1}
TAIR10AT1G80950.12E-134Phospholipid/glycerol acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7836697378371502+
GWHAAZE00000004mRNA7836697378371502+
GWHAAZE00000004exon7836697378367470+
GWHAAZE00000004exon7836827078368389+
GWHAAZE00000004exon7836851778368554+
GWHAAZE00000004exon7836864978368713+
GWHAAZE00000004exon7836909378369161+
GWHAAZE00000004exon7836990378370036+
GWHAAZE00000004exon7837049478370634+
GWHAAZE00000004exon7837139578371502+
GWHAAZE00000004CDS7836697378367470+
GWHAAZE00000004CDS7836827078368389+
GWHAAZE00000004CDS7836851778368554+
GWHAAZE00000004CDS7836864978368713+
GWHAAZE00000004CDS7836909378369161+
GWHAAZE00000004CDS7836990378370036+
GWHAAZE00000004CDS7837049478370634+
GWHAAZE00000004CDS7837139578371502+
Transcript Sequence

Network for GWHGAAZE016537

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase1772903.00E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13510LPCAT1_2 Metabolic pathways map01100
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.150
SRR3591706second leaf20.287
SRR3591707mature leaf17.183
SRR3591708Shoot apex31.188
SRR3591709Stem39.332
SRR3591710White floral bud63.073
SRR3591711White flower47.036
SRR3591712Green floral bud66.552
SRR3591713Yellow flower44.490
SRP173429 SRR8316895Juvenile bud stage 30.686
SRR8316896Juvenile bud stage 45.439
SRR8316897Juvenile bud stage 24.341
SRR8316894Third green stage 19.351
SRR8316900Third green stage 69.810
SRR8316901Third green stage 65.027
SRR8316898Complete white stage 37.283
SRR8316899Complete white stage 104.415
SRR8316903Complete white stage 56.833
SRR8316902Silver flowering stage23.213
SRR8316904Silver flowering stage33.046
SRR8316905Silver flowering stage16.951
SRR8316906Gold flowering stage 47.105
SRR8316907Gold flowering stage 45.934
SRR8316908Gold flowering stage 50.479
SRP132670SRR6706286Control68.005
SRR6706287Light intensity 50%64.884
SRR6706288Light intensity 20%62.218
CNP0000432CNS0095592Slightly white alabastrum(diploid) 145.325
CNS0095593Slightly white alabastrum(diploid) 252.555
CNS0095594Slightly white alabastrum(diploid) 343.485
CNS0095595Whole white alabastrum(diploid) 245.798
CNS0095596Whole white alabastrum(diploid) 353.210
CNS0095597Whole white alabastrum(diploid) 440.554
CNS0095598Silvery flower (diploied) 149.544
CNS0095599Silvery flower (diploied) 245.823
CNS0095600Silvery flower (diploied) 372.890
CNS0095601Golden flower (diploid) 146.874
CNS0095602Golden flower (diploid) 268.691
CNS0095603Golden flower (diploid) 365.432
CNS0095604Slightly white alabastrum(tetraploid) 151.298
CNS0095605Slightly white alabastrum(tetraploid) 246.582
CNS0095606Slightly white alabastrum(tetraploid) 379.603
CNS0095607Whole white alabastrum(tetraploid) 133.370
CNS0095608Whole white alabastrum(tetraploid) 232.640
CNS0095609Whole white alabastrum(tetraploid) 365.113
CNS0095610Silvery flower (tetraploid) 171.781
CNS0095611Silvery flower (tetraploid) 272.687
CNS0095612Silvery flower (tetraploid) 354.607
CNS0095613Golden flower (tetraploid) 134.318
CNS0095614Golden flower (tetraploid) 256.817
CNS0095615Golden flower (tetraploid) 349.329
CRA001975CRR073297Stem 143.189
CRR073298Stem 246.264
CRR073299Stem 338.265
CRR073300Leaf 151.758
CRR073301Leaf 243.514
CRR073302Leaf 352.530
CRR073303Juvenile bud 152.559
CRR073304Juvenile bud 244.493
CRR073305Juvenile bud 355.251
CRR073306Third green 116.721
CRR073307Third green 217.444
CRR073308Third green 323.052
CRR073309Second white 117.430
CRR073310Second white 217.686
CRR073311Second white 312.688
CRR073312Silver flowering 110.409
CRR073313Silver flowering 28.764
CRR073314Silver flowering 310.091
CRR073315Gold flowering 118.292
CRR073316Gold flowering 222.502
CRR073317Gold flowering 317.934
CRR073318Tawny withering 126.919
CRR073319Tawny withering 223.737
CRR073320Tawny withering 321.480