Detail information of GWHGAAZE016653


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010275342.13.31056E-10PREDICTED: uncharacterized protein LOC104610424 [Nelumbo nucifera]
trEMBLtr|A0A067KHK9|A0A067KHK9_JATCU0.0000002Uncharacterized protein {ECO:0000313|EMBL:KDP31715.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8026781180272241+
GWHAAZE00000004mRNA8026781180272241+
GWHAAZE00000004exon8026781180268596+
GWHAAZE00000004exon8027141080271636+
GWHAAZE00000004exon8027217580272241+
GWHAAZE00000004CDS8026781180268596+
GWHAAZE00000004CDS8027141080271636+
GWHAAZE00000004CDS8027217580272241+
Transcript Sequence

Network for GWHGAAZE016653

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0228


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.274
SRR3591706second leaf0.113
SRR3591707mature leaf0.270
SRR3591708Shoot apex0.000
SRR3591709Stem0.305
SRR3591710White floral bud0.295
SRR3591711White flower0.222
SRR3591712Green floral bud0.021
SRR3591713Yellow flower0.160
SRP173429 SRR8316895Juvenile bud stage 1.238
SRR8316896Juvenile bud stage 1.868
SRR8316897Juvenile bud stage 0.520
SRR8316894Third green stage 0.807
SRR8316900Third green stage 1.344
SRR8316901Third green stage 2.249
SRR8316898Complete white stage 0.626
SRR8316899Complete white stage 1.631
SRR8316903Complete white stage 3.239
SRR8316902Silver flowering stage1.367
SRR8316904Silver flowering stage1.932
SRR8316905Silver flowering stage1.334
SRR8316906Gold flowering stage 2.907
SRR8316907Gold flowering stage 2.921
SRR8316908Gold flowering stage 2.494
SRP132670SRR6706286Control0.623
SRR6706287Light intensity 50%0.924
SRR6706288Light intensity 20%1.012
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.580
CNS0095593Slightly white alabastrum(diploid) 20.991
CNS0095594Slightly white alabastrum(diploid) 31.221
CNS0095595Whole white alabastrum(diploid) 21.129
CNS0095596Whole white alabastrum(diploid) 30.091
CNS0095597Whole white alabastrum(diploid) 40.669
CNS0095598Silvery flower (diploied) 10.894
CNS0095599Silvery flower (diploied) 20.744
CNS0095600Silvery flower (diploied) 32.623
CNS0095601Golden flower (diploid) 10.848
CNS0095602Golden flower (diploid) 21.464
CNS0095603Golden flower (diploid) 31.331
CNS0095604Slightly white alabastrum(tetraploid) 12.328
CNS0095605Slightly white alabastrum(tetraploid) 21.709
CNS0095606Slightly white alabastrum(tetraploid) 34.189
CNS0095607Whole white alabastrum(tetraploid) 11.739
CNS0095608Whole white alabastrum(tetraploid) 20.428
CNS0095609Whole white alabastrum(tetraploid) 32.946
CNS0095610Silvery flower (tetraploid) 15.853
CNS0095611Silvery flower (tetraploid) 23.198
CNS0095612Silvery flower (tetraploid) 34.335
CNS0095613Golden flower (tetraploid) 11.588
CNS0095614Golden flower (tetraploid) 22.574
CNS0095615Golden flower (tetraploid) 32.759
CRA001975CRR073297Stem 11.493
CRR073298Stem 21.023
CRR073299Stem 30.002
CRR073300Leaf 11.994
CRR073301Leaf 21.523
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.246
CRR073304Juvenile bud 20.062
CRR073305Juvenile bud 30.276
CRR073306Third green 10.012
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.030
CRR073313Silver flowering 20.099
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.454
CRR073316Gold flowering 20.122
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.411
CRR073319Tawny withering 20.331
CRR073320Tawny withering 30.000