Detail information of GWHGAAZE016664


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010664088.10PREDICTED: WD repeat-containing protein DWA2 isoform X2 [Vitis vinifera]
Swissprottr|Q6NPN9|DWA2_ARATH0WD repeat-containing protein DWA2
trEMBLtr|E0CQR7|E0CQR7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI18871.3}
TAIR10AT1G20540.16E-162Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8051363180522270-
GWHAAZE00000004mRNA8051363180522270-
GWHAAZE00000004exon8052212680522270-
GWHAAZE00000004exon8051991680519965-
GWHAAZE00000004exon8051972280519805-
GWHAAZE00000004exon8051935880519490-
GWHAAZE00000004exon8051857580518686-
GWHAAZE00000004exon8051786480517963-
GWHAAZE00000004exon8051639380516520-
GWHAAZE00000004exon8051505480515123-
GWHAAZE00000004exon8051452580514613-
GWHAAZE00000004exon8051434480514370-
GWHAAZE00000004exon8051397280514106-
GWHAAZE00000004exon8051380480513877-
GWHAAZE00000004exon8051363180513728-
GWHAAZE00000004CDS8052212680522270-
GWHAAZE00000004CDS8051991680519965-
GWHAAZE00000004CDS8051972280519805-
GWHAAZE00000004CDS8051935880519490-
GWHAAZE00000004CDS8051857580518686-
GWHAAZE00000004CDS8051786480517963-
GWHAAZE00000004CDS8051639380516520-
GWHAAZE00000004CDS8051505480515123-
GWHAAZE00000004CDS8051452580514613-
GWHAAZE00000004CDS8051434480514370-
GWHAAZE00000004CDS8051397280514106-
GWHAAZE00000004CDS8051380480513877-
GWHAAZE00000004CDS8051363180513728-
Transcript Sequence

Network for GWHGAAZE016664

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.675
SRR3591706second leaf13.617
SRR3591707mature leaf6.896
SRR3591708Shoot apex23.179
SRR3591709Stem28.664
SRR3591710White floral bud25.704
SRR3591711White flower26.192
SRR3591712Green floral bud25.589
SRR3591713Yellow flower26.858
SRP173429 SRR8316895Juvenile bud stage 18.773
SRR8316896Juvenile bud stage 26.841
SRR8316897Juvenile bud stage 12.747
SRR8316894Third green stage 8.978
SRR8316900Third green stage 26.569
SRR8316901Third green stage 26.308
SRR8316898Complete white stage 14.885
SRR8316899Complete white stage 28.886
SRR8316903Complete white stage 19.948
SRR8316902Silver flowering stage14.845
SRR8316904Silver flowering stage15.017
SRR8316905Silver flowering stage8.516
SRR8316906Gold flowering stage 25.442
SRR8316907Gold flowering stage 25.946
SRR8316908Gold flowering stage 23.966
SRP132670SRR6706286Control24.663
SRR6706287Light intensity 50%27.557
SRR6706288Light intensity 20%27.802
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.060
CNS0095593Slightly white alabastrum(diploid) 218.280
CNS0095594Slightly white alabastrum(diploid) 320.134
CNS0095595Whole white alabastrum(diploid) 216.150
CNS0095596Whole white alabastrum(diploid) 317.324
CNS0095597Whole white alabastrum(diploid) 412.712
CNS0095598Silvery flower (diploied) 121.554
CNS0095599Silvery flower (diploied) 218.970
CNS0095600Silvery flower (diploied) 325.091
CNS0095601Golden flower (diploid) 115.705
CNS0095602Golden flower (diploid) 220.563
CNS0095603Golden flower (diploid) 318.892
CNS0095604Slightly white alabastrum(tetraploid) 121.256
CNS0095605Slightly white alabastrum(tetraploid) 218.228
CNS0095606Slightly white alabastrum(tetraploid) 328.406
CNS0095607Whole white alabastrum(tetraploid) 116.237
CNS0095608Whole white alabastrum(tetraploid) 213.540
CNS0095609Whole white alabastrum(tetraploid) 324.079
CNS0095610Silvery flower (tetraploid) 126.866
CNS0095611Silvery flower (tetraploid) 227.488
CNS0095612Silvery flower (tetraploid) 331.673
CNS0095613Golden flower (tetraploid) 116.444
CNS0095614Golden flower (tetraploid) 219.696
CNS0095615Golden flower (tetraploid) 318.142
CRA001975CRR073297Stem 130.306
CRR073298Stem 226.765
CRR073299Stem 326.775
CRR073300Leaf 133.491
CRR073301Leaf 230.018
CRR073302Leaf 329.975
CRR073303Juvenile bud 130.255
CRR073304Juvenile bud 229.009
CRR073305Juvenile bud 330.645
CRR073306Third green 118.510
CRR073307Third green 219.301
CRR073308Third green 321.513
CRR073309Second white 132.991
CRR073310Second white 224.746
CRR073311Second white 325.179
CRR073312Silver flowering 123.799
CRR073313Silver flowering 223.214
CRR073314Silver flowering 324.318
CRR073315Gold flowering 18.180
CRR073316Gold flowering 29.854
CRR073317Gold flowering 312.215
CRR073318Tawny withering 127.625
CRR073319Tawny withering 223.908
CRR073320Tawny withering 328.524