Detail information of GWHGAAZE016714


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277078.14.8031E-125PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
trEMBLtr|A5B851|A5B851_VITVI2E-125Putative uncharacterized protein {ECO:0000313|EMBL:CAN67639.1}
TAIR10AT1G76590.14E-87PLATZ transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8140406081405129+
GWHAAZE00000004mRNA8140406081405129+
GWHAAZE00000004exon8140406081404290+
GWHAAZE00000004exon8140447281404687+
GWHAAZE00000004exon8140480081405129+
GWHAAZE00000004CDS8140406081404290+
GWHAAZE00000004CDS8140447281404687+
GWHAAZE00000004CDS8140480081405129+
Transcript Sequence

Network for GWHGAAZE016714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04640.15PLATZ791502.90E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPLATZ

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.173
SRR3591706second leaf8.842
SRR3591707mature leaf36.623
SRR3591708Shoot apex8.099
SRR3591709Stem20.202
SRR3591710White floral bud62.774
SRR3591711White flower159.856
SRR3591712Green floral bud6.066
SRR3591713Yellow flower208.317
SRP173429 SRR8316895Juvenile bud stage 3.238
SRR8316896Juvenile bud stage 7.600
SRR8316897Juvenile bud stage 2.632
SRR8316894Third green stage 2.265
SRR8316900Third green stage 4.622
SRR8316901Third green stage 3.870
SRR8316898Complete white stage 27.984
SRR8316899Complete white stage 9.885
SRR8316903Complete white stage 40.262
SRR8316902Silver flowering stage80.930
SRR8316904Silver flowering stage103.671
SRR8316905Silver flowering stage53.202
SRR8316906Gold flowering stage 300.564
SRR8316907Gold flowering stage 211.740
SRR8316908Gold flowering stage 230.114
SRP132670SRR6706286Control8.170
SRR6706287Light intensity 50%7.134
SRR6706288Light intensity 20%5.821
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.549
CNS0095593Slightly white alabastrum(diploid) 26.097
CNS0095594Slightly white alabastrum(diploid) 33.370
CNS0095595Whole white alabastrum(diploid) 25.878
CNS0095596Whole white alabastrum(diploid) 33.231
CNS0095597Whole white alabastrum(diploid) 45.782
CNS0095598Silvery flower (diploied) 131.068
CNS0095599Silvery flower (diploied) 237.798
CNS0095600Silvery flower (diploied) 3104.603
CNS0095601Golden flower (diploid) 158.696
CNS0095602Golden flower (diploid) 2109.852
CNS0095603Golden flower (diploid) 3112.497
CNS0095604Slightly white alabastrum(tetraploid) 16.155
CNS0095605Slightly white alabastrum(tetraploid) 25.086
CNS0095606Slightly white alabastrum(tetraploid) 38.808
CNS0095607Whole white alabastrum(tetraploid) 15.929
CNS0095608Whole white alabastrum(tetraploid) 23.657
CNS0095609Whole white alabastrum(tetraploid) 36.224
CNS0095610Silvery flower (tetraploid) 1110.417
CNS0095611Silvery flower (tetraploid) 2123.991
CNS0095612Silvery flower (tetraploid) 3108.024
CNS0095613Golden flower (tetraploid) 1166.837
CNS0095614Golden flower (tetraploid) 2156.732
CNS0095615Golden flower (tetraploid) 3439.838
CRA001975CRR073297Stem 16.555
CRR073298Stem 26.849
CRR073299Stem 34.490
CRR073300Leaf 17.868
CRR073301Leaf 25.625
CRR073302Leaf 33.413
CRR073303Juvenile bud 14.894
CRR073304Juvenile bud 23.976
CRR073305Juvenile bud 35.191
CRR073306Third green 149.283
CRR073307Third green 237.204
CRR073308Third green 345.522
CRR073309Second white 159.026
CRR073310Second white 2101.664
CRR073311Second white 386.805
CRR073312Silver flowering 147.346
CRR073313Silver flowering 230.197
CRR073314Silver flowering 339.108
CRR073315Gold flowering 118.472
CRR073316Gold flowering 222.912
CRR073317Gold flowering 311.443
CRR073318Tawny withering 16.608
CRR073319Tawny withering 24.688
CRR073320Tawny withering 32.096