Detail information of GWHGAAZE016745


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010100868.11.24638E-63Lysine-specific demethylase 3A [Morus notabilis]
Swissprottr|Q9SSE9|JMJ25_ARATH6E-44Lysine-specific demethylase JMJ25
trEMBLtr|W9RE34|W9RE34_9ROSA5E-64Lysine-specific demethylase 3A {ECO:0000313|EMBL:EXB85447.1}
TAIR10AT1G62310.15E-47transcription factor jumonji (jmjC) domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8189768181899467-
GWHAAZE00000004mRNA8189768181899467-
GWHAAZE00000004exon8189909081899467-
GWHAAZE00000004exon8189787181897943-
GWHAAZE00000004exon8189768181897775-
GWHAAZE00000004CDS8189909081899467-
GWHAAZE00000004CDS8189787181897943-
GWHAAZE00000004CDS8189768181897775-
Transcript Sequence

Network for GWHGAAZE016745

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02373.23JmjC861793.60E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji

KEGG pathway

KO Enzyme pathway mapID
K15601KDM3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.254
SRR3591706second leaf1.437
SRR3591707mature leaf1.498
SRR3591708Shoot apex1.684
SRR3591709Stem0.975
SRR3591710White floral bud4.452
SRR3591711White flower4.053
SRR3591712Green floral bud6.049
SRR3591713Yellow flower5.412
SRP173429 SRR8316895Juvenile bud stage 1.017
SRR8316896Juvenile bud stage 2.230
SRR8316897Juvenile bud stage 2.114
SRR8316894Third green stage 0.850
SRR8316900Third green stage 2.919
SRR8316901Third green stage 3.581
SRR8316898Complete white stage 0.123
SRR8316899Complete white stage 4.808
SRR8316903Complete white stage 1.307
SRR8316902Silver flowering stage0.818
SRR8316904Silver flowering stage1.915
SRR8316905Silver flowering stage0.672
SRR8316906Gold flowering stage 2.492
SRR8316907Gold flowering stage 1.154
SRR8316908Gold flowering stage 2.975
SRP132670SRR6706286Control1.734
SRR6706287Light intensity 50%1.733
SRR6706288Light intensity 20%2.429
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.020
CNS0095593Slightly white alabastrum(diploid) 21.161
CNS0095594Slightly white alabastrum(diploid) 31.972
CNS0095595Whole white alabastrum(diploid) 22.607
CNS0095596Whole white alabastrum(diploid) 30.586
CNS0095597Whole white alabastrum(diploid) 41.253
CNS0095598Silvery flower (diploied) 12.207
CNS0095599Silvery flower (diploied) 20.760
CNS0095600Silvery flower (diploied) 32.999
CNS0095601Golden flower (diploid) 11.183
CNS0095602Golden flower (diploid) 24.463
CNS0095603Golden flower (diploid) 33.774
CNS0095604Slightly white alabastrum(tetraploid) 12.289
CNS0095605Slightly white alabastrum(tetraploid) 21.104
CNS0095606Slightly white alabastrum(tetraploid) 34.467
CNS0095607Whole white alabastrum(tetraploid) 10.386
CNS0095608Whole white alabastrum(tetraploid) 21.707
CNS0095609Whole white alabastrum(tetraploid) 32.023
CNS0095610Silvery flower (tetraploid) 13.952
CNS0095611Silvery flower (tetraploid) 27.077
CNS0095612Silvery flower (tetraploid) 33.356
CNS0095613Golden flower (tetraploid) 12.868
CNS0095614Golden flower (tetraploid) 23.880
CNS0095615Golden flower (tetraploid) 32.769
CRA001975CRR073297Stem 12.298
CRR073298Stem 22.099
CRR073299Stem 32.171
CRR073300Leaf 12.132
CRR073301Leaf 21.909
CRR073302Leaf 30.436
CRR073303Juvenile bud 10.907
CRR073304Juvenile bud 22.334
CRR073305Juvenile bud 31.439
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.006
CRR073309Second white 10.746
CRR073310Second white 20.176
CRR073311Second white 30.729
CRR073312Silver flowering 10.080
CRR073313Silver flowering 21.231
CRR073314Silver flowering 30.054
CRR073315Gold flowering 11.458
CRR073316Gold flowering 20.638
CRR073317Gold flowering 30.232
CRR073318Tawny withering 10.999
CRR073319Tawny withering 22.955
CRR073320Tawny withering 30.373