Gene detail

Detail information of GWHGAAZE016775

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011099673.1	PREDICTED: probable glucan 1,3-alpha-glucosidase [Sesamum indicum]
Swissprot	tr\|Q9FN05\|PSL5_ARATH	Probable glucan 1,3-alpha-glucosidase (Precursor)
trEMBL	tr\|A0A061DKW3\|A0A061DKW3_THECC	Glycosyl hydrolases family 31 protein isoform 1 {ECO:0000313\|EMBL:EOX92666.1}
TAIR10	AT5G63840.1	Glycosyl hydrolases family 31 protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	82633706	82641516	+
GWHAAZE00000004	mRNA	82633706	82641516	+
GWHAAZE00000004	exon	82633706	82633998	+
GWHAAZE00000004	exon	82634869	82636165	+
GWHAAZE00000004	exon	82637249	82637522	+
GWHAAZE00000004	exon	82638348	82638483	+
GWHAAZE00000004	exon	82640045	82640255	+
GWHAAZE00000004	exon	82640542	82640748	+
GWHAAZE00000004	exon	82641154	82641516	+
GWHAAZE00000004	CDS	82633706	82633998	+
GWHAAZE00000004	CDS	82634869	82636165	+
GWHAAZE00000004	CDS	82637249	82637522	+
GWHAAZE00000004	CDS	82638348	82638483	+
GWHAAZE00000004	CDS	82640045	82640255	+
GWHAAZE00000004	CDS	82640542	82640748	+
GWHAAZE00000004	CDS	82641154	82641516	+

Transcript Sequence
>GWHTAAZE016795 ATGAAGAAATTATCATCACATCGTTTTCTTCTTGTTGTCCTCCTTCTGGTGGGAGCTCAATTGAGCTGGGTTTCTTCTTGGAAAAGAGACGAATTCAGGAACTGTAACCAAACCCCATTCTGTAAACGAGCTCGATCCCGCAAACCCGGTTCTTCCTCTCTGATCGCCACCGATGTTACCATTGATGATGGTGATCTCACCGCTAAACTCGTACCCAAGAATAACCCACTTGAGGAAGAGCAAATTAAGCCTTTGATTCTTACCCTCTCCGTCTATCAAGATGGCACAGTCAGGTTCAAGATTGATGAGGACCCCACTCTCCATCCCCCCAAAAAACGTTTTGAAGTTCCAGATGTTATTGTACCTGAATTCTTGGACAAAAAGCTTTGGTTACAGAGGTTTTCCAAAGAATTGCTTGATGGGGATTCTGTATCCTCATCTATTATTTACTTATCGGATGATTACGAAGCTGTTCTTCGCCATGATCCCTTTGAGGTTTTCATTAGGGAGAAGGGAGAGGGAGGTAAGCGATTAATGTCGTTGAATTCACATGGATTGTTTGATTTTGAACAATTGGGAGTGAAAATGGAAGGGGAAGATTGGGAGGAGAGGTTTAGAGGACATACTGATACCAGGCCATACGGGCCTCAGTCAATTAGTTTTGACGTGTCCTTTTATGATGCCGATTTTGTTTATGGTATTCCTGAACATGCCACTAGTCTTGCTTTGAATCCCACTAAGGGACCTGGGGTTGAGGAATCTGAGCCTTATCGCCTTTTTAACTTGGATGTCTTCGAATACATTCATGATTCTCCATTTGGGCTTTATGGTTCAATCCCATTCATGCTTTCTCATGGGAAATCCCGGGGAACTTGTGGGTTTCTCTGGTTGAATGCTGCCGAGATGCAGATTGATGTTCTTGGCCGTGGATGGGATGATTCTGAATCTTCTTTGATCTCACTCCCTTCTGATCAAAATCGGATCGATACACTGTGGATGAGTGAGGCTGGTATTGTAGATGTGTTCTTCTTTGTGGGTCCTGGACCGAAGGATGTTGTTAGGCAGTATACTAGCGTGACCGGGACCCCAGCCATGCCGCAGCTGTTTGCCACTGCGTATCATCAGTGCAGATGGAATTATAGGGATGAGGAGGATGTAAGTGATGTTGATTCGAAATTTGACGAACACGACATCCCATATGATGTTTTATGGCTTGATATTGAGCACACGGATGGAAAGAAGTATTTTACATGGGATAGGGTGCTTTTTCCTAATCCCGAGGAAATGCAGAATCAATTGGCTGCAAAGGGCAGGCGCATGGTTACCATTGTGGATCCTCATATAAAGAGGGATGAATCTTACCATATACACAAGGAGGCTTCGAAGAAGGGCTATTATGTTAAGGATGCAACCGGTAAGGACTATGATGGTTGGTGCTGGCCTGGTTCATCCTCGTATGTGGATATGTTGAATCCAGAGATAAGATCATGGTGGGCTGATAAATTCTCCTACCATGATTATGTTGGTTCAACTCCTTCCTTGTACATCTGGAATGATATGAATGAACCATCTGTTTTTAACGGTCCCGAGGTGACAATGCCTAGAGATGCTGTACATTATGGAGGTGTGGAGCATAGAGAGTTACATAATGCCTATGGTTACTACTTTCACATGGCTACGTCGGCTGGGCTTGTAAAGCGAGAAGATGGCAAGGACAGGCCTTTTGTTCTATCAAGAGCATTTTTCCCTGGAAGCCAAAGGTATGGTGCAGTTTGGACAGGAGACAACACTGCTGAATGGGAGCAACTCAGGGTTTCAGTTCCAATGATTTTGACGCTCGGTCTTACTGGAATTTCATTCTCCGGTGCGGATGTTGGTGGATTTTTCGGCAATCCAGAACCGGAGCTGTTAGTTCGATGGTATCAACTGGGTGCCTTCTACCCGTTCTTTAGGGCCCATGCCCACCACGACACCAAAAGACGTGAACCTTGGTTATTTGGAGAACGAAATACAGAATTGATGAGGGAAGCTATACATATCCGTTACATGTTGCTTCCATATTTCTACACGTTATTCAGAGAGGCAAACACAACTGGTGTTCCAGTTGTTCGTCCGCTTTGGATGGAGTTCCCAGCTGATGAATCCACTTTCAGCAATGACGAGGCCTTCATGGTTGGAAACTGTCTCCTTGTTCAAGGAATTTATACAAAGGATGCTAAACACGTGTCGGTGTATCTCCCGGGTCCAGAATCTTGGTATGACTTTAGAAGCGGATCTGTGTACAAGGGAGGTGTGACTCACAAGCTGCATGCATCCGAAGAATCTATTCCTTCTTTCCAAAGGGCTGGAACCATCCTTCCGAGGAAAGATCGTTTCCGCAGAAGTTCCACACAGATGGAGAATGATCCCATCACTCTGGTAATAGCACTTAATAGTTCCCAGGCGGCTGAAGGGGAACTATACATAGACGATGGAAAGAGCTTTGATTTTGAGAAAGGAGCCTTCATTCATCGTCATTTCATATACTCGGACGGGAAGCTTACATCTATAAACCTGGCACCTCCTCCTGCCCATTATTCTTCTGATTGCACGGTAGAGAGGATCATACTGTTAGGACTCTCTCCTGCACCAAAAAATGCCATTATTGAACCGGCAAACCACAAGGCCGAAATTGAACATGGCCCGCTTCATCTTCGGCCAGCAGCAGGGAGAGCTTCTGTTCTTACCATCCGGAAGCCTAATGTTCGTATTGCTGATAATTGGACGATCAAAATTTCGTGA

Network for GWHGAAZE016775

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13802.7	Gal_mutarotas_2	229	305	2.00E-19
PF01055.27	Glyco_hydro_31	342	786	4.00E-152
PF17137.5	DUF5110	804	859	2.40E-06

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05546	GANAB	Metabolic pathways	map01100
		N-Glycan biosynthesis	map00510
		Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0003824	molecular_function	catalytic activity
GO:0030246	molecular_function	carbohydrate binding
GO:0004553	molecular_function	hydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	84.855
	SRR3591706	second leaf	36.642
	SRR3591707	mature leaf	22.559
	SRR3591708	Shoot apex	66.600
	SRR3591709	Stem	43.809
	SRR3591710	White floral bud	53.417
	SRR3591711	White flower	64.842
	SRR3591712	Green floral bud	71.477
	SRR3591713	Yellow flower	41.613
SRP173429	SRR8316895	Juvenile bud stage	35.947
	SRR8316896	Juvenile bud stage	48.195
	SRR8316897	Juvenile bud stage	24.445
	SRR8316894	Third green stage	21.601
	SRR8316900	Third green stage	60.546
	SRR8316901	Third green stage	50.877
	SRR8316898	Complete white stage	18.098
	SRR8316899	Complete white stage	52.890
	SRR8316903	Complete white stage	28.453
	SRR8316902	Silver flowering stage	16.322
	SRR8316904	Silver flowering stage	22.809
	SRR8316905	Silver flowering stage	10.808
	SRR8316906	Gold flowering stage	32.494
	SRR8316907	Gold flowering stage	34.993
	SRR8316908	Gold flowering stage	38.385
SRP132670	SRR6706286	Control	55.036
	SRR6706287	Light intensity 50%	55.096
	SRR6706288	Light intensity 20%	60.275
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	41.975
	CNS0095593	Slightly white alabastrum(diploid) 2	39.801
	CNS0095594	Slightly white alabastrum(diploid) 3	36.456
	CNS0095595	Whole white alabastrum(diploid) 2	35.865
	CNS0095596	Whole white alabastrum(diploid) 3	38.576
	CNS0095597	Whole white alabastrum(diploid) 4	28.993
	CNS0095598	Silvery flower (diploied) 1	32.254
	CNS0095599	Silvery flower (diploied) 2	36.710
	CNS0095600	Silvery flower (diploied) 3	47.399
	CNS0095601	Golden flower (diploid) 1	26.611
	CNS0095602	Golden flower (diploid) 2	47.680
	CNS0095603	Golden flower (diploid) 3	45.538
	CNS0095604	Slightly white alabastrum(tetraploid) 1	53.241
	CNS0095605	Slightly white alabastrum(tetraploid) 2	47.097
	CNS0095606	Slightly white alabastrum(tetraploid) 3	82.257
	CNS0095607	Whole white alabastrum(tetraploid) 1	33.466
	CNS0095608	Whole white alabastrum(tetraploid) 2	31.292
	CNS0095609	Whole white alabastrum(tetraploid) 3	61.360
	CNS0095610	Silvery flower (tetraploid) 1	43.432
	CNS0095611	Silvery flower (tetraploid) 2	42.412
	CNS0095612	Silvery flower (tetraploid) 3	36.089
	CNS0095613	Golden flower (tetraploid) 1	16.949
	CNS0095614	Golden flower (tetraploid) 2	39.341
	CNS0095615	Golden flower (tetraploid) 3	29.168
CRA001975	CRR073297	Stem 1	65.538
	CRR073298	Stem 2	56.605
	CRR073299	Stem 3	75.511
	CRR073300	Leaf 1	67.831
	CRR073301	Leaf 2	62.753
	CRR073302	Leaf 3	79.631
	CRR073303	Juvenile bud 1	73.243
	CRR073304	Juvenile bud 2	56.311
	CRR073305	Juvenile bud 3	75.768
	CRR073306	Third green 1	25.391
	CRR073307	Third green 2	21.475
	CRR073308	Third green 3	23.480
	CRR073309	Second white 1	38.657
	CRR073310	Second white 2	25.251
	CRR073311	Second white 3	26.811
	CRR073312	Silver flowering 1	34.725
	CRR073313	Silver flowering 2	49.507
	CRR073314	Silver flowering 3	39.196
	CRR073315	Gold flowering 1	20.187
	CRR073316	Gold flowering 2	24.584
	CRR073317	Gold flowering 3	25.038
	CRR073318	Tawny withering 1	48.747
	CRR073319	Tawny withering 2	36.019
	CRR073320	Tawny withering 3	41.800