Detail information of GWHGAAZE016793


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010243485.13.82151E-37PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 [Nelumbo nucifera]
Swissprottr|Q8GXR9|DHNA_ARATH5E-36Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A0A072TUV5|A0A072TUV5_MEDTR2E-36NADH dehydrogenase {ECO:0000313|EMBL:KEH20931.1}
TAIR10AT5G08740.17E-29NAD(P)H dehydrogenase C1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8303545883036609+
GWHAAZE00000004mRNA8303545883036609+
GWHAAZE00000004exon8303545883035542+
GWHAAZE00000004exon8303646783036609+
GWHAAZE00000004CDS8303545883035542+
GWHAAZE00000004CDS8303646783036609+
Transcript Sequence

Network for GWHGAAZE016793

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K17872NDC1, ndbB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.342
SRR3591706second leaf26.198
SRR3591707mature leaf26.320
SRR3591708Shoot apex26.776
SRR3591709Stem15.272
SRR3591710White floral bud12.445
SRR3591711White flower12.082
SRR3591712Green floral bud16.999
SRR3591713Yellow flower12.775
SRP173429 SRR8316895Juvenile bud stage 12.671
SRR8316896Juvenile bud stage 19.015
SRR8316897Juvenile bud stage 10.881
SRR8316894Third green stage 7.498
SRR8316900Third green stage 20.279
SRR8316901Third green stage 19.262
SRR8316898Complete white stage 11.156
SRR8316899Complete white stage 26.414
SRR8316903Complete white stage 18.387
SRR8316902Silver flowering stage9.014
SRR8316904Silver flowering stage8.569
SRR8316905Silver flowering stage6.187
SRR8316906Gold flowering stage 22.620
SRR8316907Gold flowering stage 17.321
SRR8316908Gold flowering stage 22.395
SRP132670SRR6706286Control16.173
SRR6706287Light intensity 50%13.624
SRR6706288Light intensity 20%16.500
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.531
CNS0095593Slightly white alabastrum(diploid) 222.477
CNS0095594Slightly white alabastrum(diploid) 317.831
CNS0095595Whole white alabastrum(diploid) 222.377
CNS0095596Whole white alabastrum(diploid) 323.849
CNS0095597Whole white alabastrum(diploid) 423.206
CNS0095598Silvery flower (diploied) 126.250
CNS0095599Silvery flower (diploied) 222.326
CNS0095600Silvery flower (diploied) 326.130
CNS0095601Golden flower (diploid) 128.122
CNS0095602Golden flower (diploid) 217.455
CNS0095603Golden flower (diploid) 318.490
CNS0095604Slightly white alabastrum(tetraploid) 117.453
CNS0095605Slightly white alabastrum(tetraploid) 222.279
CNS0095606Slightly white alabastrum(tetraploid) 319.028
CNS0095607Whole white alabastrum(tetraploid) 117.479
CNS0095608Whole white alabastrum(tetraploid) 217.689
CNS0095609Whole white alabastrum(tetraploid) 319.364
CNS0095610Silvery flower (tetraploid) 121.110
CNS0095611Silvery flower (tetraploid) 226.672
CNS0095612Silvery flower (tetraploid) 333.703
CNS0095613Golden flower (tetraploid) 119.953
CNS0095614Golden flower (tetraploid) 212.716
CNS0095615Golden flower (tetraploid) 319.904
CRA001975CRR073297Stem 124.589
CRR073298Stem 220.131
CRR073299Stem 322.461
CRR073300Leaf 121.111
CRR073301Leaf 226.585
CRR073302Leaf 321.668
CRR073303Juvenile bud 123.174
CRR073304Juvenile bud 222.450
CRR073305Juvenile bud 320.169
CRR073306Third green 114.120
CRR073307Third green 28.680
CRR073308Third green 312.032
CRR073309Second white 117.397
CRR073310Second white 214.165
CRR073311Second white 311.210
CRR073312Silver flowering 114.894
CRR073313Silver flowering 213.042
CRR073314Silver flowering 310.937
CRR073315Gold flowering 152.626
CRR073316Gold flowering 259.280
CRR073317Gold flowering 330.111
CRR073318Tawny withering 118.087
CRR073319Tawny withering 224.708
CRR073320Tawny withering 314.950