Detail information of GWHGAAZE016796


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006429751.11.28662E-09hypothetical protein CICLE_v10011552mg [Citrus clementina]
trEMBLtr|V4T0G1|V4T0G1_9ROSI5E-10Uncharacterized protein {ECO:0000313|EMBL:ESR42991.1}
TAIR10AT2G32170.10.000001S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8307193983074675-
GWHAAZE00000004mRNA8307193983074675-
GWHAAZE00000004exon8307441383074675-
GWHAAZE00000004exon8307193983072093-
GWHAAZE00000004CDS8307441383074675-
GWHAAZE00000004CDS8307195883072093-
GWHAAZE00000004three_prime_UTR8307193983071957-
Transcript Sequence

Network for GWHGAAZE016796

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19787CARNMT1 Metabolic pathways map01100
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.787
SRR3591706second leaf2.671
SRR3591707mature leaf1.703
SRR3591708Shoot apex4.955
SRR3591709Stem3.971
SRR3591710White floral bud3.432
SRR3591711White flower3.082
SRR3591712Green floral bud2.597
SRR3591713Yellow flower1.658
SRP173429 SRR8316895Juvenile bud stage 1.994
SRR8316896Juvenile bud stage 3.648
SRR8316897Juvenile bud stage 1.977
SRR8316894Third green stage 1.421
SRR8316900Third green stage 3.728
SRR8316901Third green stage 2.638
SRR8316898Complete white stage 1.321
SRR8316899Complete white stage 5.101
SRR8316903Complete white stage 2.366
SRR8316902Silver flowering stage1.539
SRR8316904Silver flowering stage1.944
SRR8316905Silver flowering stage0.627
SRR8316906Gold flowering stage 2.586
SRR8316907Gold flowering stage 2.482
SRR8316908Gold flowering stage 1.779
SRP132670SRR6706286Control0.987
SRR6706287Light intensity 50%1.303
SRR6706288Light intensity 20%1.377
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.830
CNS0095593Slightly white alabastrum(diploid) 22.832
CNS0095594Slightly white alabastrum(diploid) 32.908
CNS0095595Whole white alabastrum(diploid) 23.005
CNS0095596Whole white alabastrum(diploid) 32.287
CNS0095597Whole white alabastrum(diploid) 41.959
CNS0095598Silvery flower (diploied) 13.643
CNS0095599Silvery flower (diploied) 22.100
CNS0095600Silvery flower (diploied) 32.505
CNS0095601Golden flower (diploid) 11.855
CNS0095602Golden flower (diploid) 22.774
CNS0095603Golden flower (diploid) 33.088
CNS0095604Slightly white alabastrum(tetraploid) 14.188
CNS0095605Slightly white alabastrum(tetraploid) 23.003
CNS0095606Slightly white alabastrum(tetraploid) 33.979
CNS0095607Whole white alabastrum(tetraploid) 12.281
CNS0095608Whole white alabastrum(tetraploid) 21.663
CNS0095609Whole white alabastrum(tetraploid) 32.708
CNS0095610Silvery flower (tetraploid) 12.033
CNS0095611Silvery flower (tetraploid) 23.936
CNS0095612Silvery flower (tetraploid) 32.906
CNS0095613Golden flower (tetraploid) 10.708
CNS0095614Golden flower (tetraploid) 21.955
CNS0095615Golden flower (tetraploid) 31.479
CRA001975CRR073297Stem 11.842
CRR073298Stem 21.793
CRR073299Stem 31.101
CRR073300Leaf 11.796
CRR073301Leaf 21.235
CRR073302Leaf 30.951
CRR073303Juvenile bud 10.659
CRR073304Juvenile bud 20.622
CRR073305Juvenile bud 31.080
CRR073306Third green 10.310
CRR073307Third green 20.138
CRR073308Third green 30.259
CRR073309Second white 10.047
CRR073310Second white 20.405
CRR073311Second white 30.153
CRR073312Silver flowering 10.530
CRR073313Silver flowering 20.189
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.570
CRR073316Gold flowering 21.355
CRR073317Gold flowering 30.261
CRR073318Tawny withering 11.015
CRR073319Tawny withering 21.207
CRR073320Tawny withering 31.129