Detail information of GWHGAAZE016798


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN64641.16.7263E-08hypothetical protein VITISV_033933 [Vitis vinifera]
trEMBLtr|A5AKD3|A5AKD3_VITVI0.00000003Putative uncharacterized protein {ECO:0000313|EMBL:CAN64641.1}
TAIR10AT2G32170.20.000002S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8308472283085197-
GWHAAZE00000004mRNA8308472283085197-
GWHAAZE00000004exon8308472283084756-
GWHAAZE00000004exon8308501183085197-
GWHAAZE00000004CDS8308501183085197-
GWHAAZE00000004CDS8308472283084756-
Transcript Sequence

Network for GWHGAAZE016798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19787CARNMT1 Metabolic pathways map01100
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.060
SRR3591706second leaf6.224
SRR3591707mature leaf3.836
SRR3591708Shoot apex6.654
SRR3591709Stem6.722
SRR3591710White floral bud6.420
SRR3591711White flower6.919
SRR3591712Green floral bud4.679
SRR3591713Yellow flower3.315
SRP173429 SRR8316895Juvenile bud stage 6.072
SRR8316896Juvenile bud stage 9.628
SRR8316897Juvenile bud stage 2.740
SRR8316894Third green stage 3.614
SRR8316900Third green stage 8.663
SRR8316901Third green stage 7.594
SRR8316898Complete white stage 3.721
SRR8316899Complete white stage 12.830
SRR8316903Complete white stage 5.382
SRR8316902Silver flowering stage2.897
SRR8316904Silver flowering stage3.627
SRR8316905Silver flowering stage2.412
SRR8316906Gold flowering stage 7.581
SRR8316907Gold flowering stage 7.486
SRR8316908Gold flowering stage 8.762
SRP132670SRR6706286Control9.901
SRR6706287Light intensity 50%8.325
SRR6706288Light intensity 20%12.614
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.112
CNS0095593Slightly white alabastrum(diploid) 22.351
CNS0095594Slightly white alabastrum(diploid) 32.346
CNS0095595Whole white alabastrum(diploid) 22.435
CNS0095596Whole white alabastrum(diploid) 33.821
CNS0095597Whole white alabastrum(diploid) 41.146
CNS0095598Silvery flower (diploied) 15.112
CNS0095599Silvery flower (diploied) 26.192
CNS0095600Silvery flower (diploied) 37.079
CNS0095601Golden flower (diploid) 12.911
CNS0095602Golden flower (diploid) 26.230
CNS0095603Golden flower (diploid) 37.373
CNS0095604Slightly white alabastrum(tetraploid) 16.931
CNS0095605Slightly white alabastrum(tetraploid) 24.778
CNS0095606Slightly white alabastrum(tetraploid) 39.867
CNS0095607Whole white alabastrum(tetraploid) 15.324
CNS0095608Whole white alabastrum(tetraploid) 22.940
CNS0095609Whole white alabastrum(tetraploid) 39.640
CNS0095610Silvery flower (tetraploid) 19.426
CNS0095611Silvery flower (tetraploid) 25.482
CNS0095612Silvery flower (tetraploid) 39.444
CNS0095613Golden flower (tetraploid) 12.666
CNS0095614Golden flower (tetraploid) 26.425
CNS0095615Golden flower (tetraploid) 35.366
CRA001975CRR073297Stem 110.112
CRR073298Stem 29.237
CRR073299Stem 38.481
CRR073300Leaf 19.149
CRR073301Leaf 212.525
CRR073302Leaf 37.497
CRR073303Juvenile bud 17.359
CRR073304Juvenile bud 24.724
CRR073305Juvenile bud 37.304
CRR073306Third green 11.008
CRR073307Third green 23.199
CRR073308Third green 33.709
CRR073309Second white 12.894
CRR073310Second white 22.259
CRR073311Second white 31.873
CRR073312Silver flowering 12.449
CRR073313Silver flowering 20.964
CRR073314Silver flowering 35.465
CRR073315Gold flowering 12.909
CRR073316Gold flowering 210.494
CRR073317Gold flowering 35.044
CRR073318Tawny withering 19.328
CRR073319Tawny withering 26.857
CRR073320Tawny withering 39.304