Detail information of GWHGAAZE016859


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG01918.10Mitogen-activated protein kinase kinase kinase 2 [Gossypium arboreum]
Swissprottr|Q9CAD5|YODA_ARATH5E-99Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|A0A068U8X3|A0A068U8X3_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_13 {ECO:0000313|EMBL:CDP04692.1}
TAIR10AT1G53570.41E-116mitogen-activated protein kinase kinase kinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8424971784254575-
GWHAAZE00000004mRNA8424971784254575-
GWHAAZE00000004exon8424971784250219-
GWHAAZE00000004exon8425050884250611-
GWHAAZE00000004exon8425101484251250-
GWHAAZE00000004exon8425232684252401-
GWHAAZE00000004exon8425249284252652-
GWHAAZE00000004exon8425314684253208-
GWHAAZE00000004exon8425337584253459-
GWHAAZE00000004exon8425424484254575-
GWHAAZE00000004CDS8425424484254575-
GWHAAZE00000004CDS8425337584253459-
GWHAAZE00000004CDS8425314684253208-
GWHAAZE00000004CDS8425249284252652-
GWHAAZE00000004CDS8425232684252401-
GWHAAZE00000004CDS8425101484251250-
GWHAAZE00000004CDS8425050884250611-
GWHAAZE00000004CDS8424996484250219-
GWHAAZE00000004three_prime_UTR8424971784249963-
Transcript Sequence

Network for GWHGAAZE016859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase922402.80E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
K04421MAP3K3, MEKK3 MAPK signaling pathway map04010
GnRH signaling pathwaymap04912
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.421
SRR3591706second leaf21.627
SRR3591707mature leaf44.374
SRR3591708Shoot apex25.769
SRR3591709Stem66.300
SRR3591710White floral bud51.728
SRR3591711White flower74.851
SRR3591712Green floral bud33.871
SRR3591713Yellow flower50.695
SRP173429 SRR8316895Juvenile bud stage 19.957
SRR8316896Juvenile bud stage 26.460
SRR8316897Juvenile bud stage 11.981
SRR8316894Third green stage 8.401
SRR8316900Third green stage 19.060
SRR8316901Third green stage 23.825
SRR8316898Complete white stage 13.366
SRR8316899Complete white stage 48.866
SRR8316903Complete white stage 28.574
SRR8316902Silver flowering stage28.039
SRR8316904Silver flowering stage31.164
SRR8316905Silver flowering stage13.425
SRR8316906Gold flowering stage 39.062
SRR8316907Gold flowering stage 47.334
SRR8316908Gold flowering stage 44.008
SRP132670SRR6706286Control24.180
SRR6706287Light intensity 50%25.491
SRR6706288Light intensity 20%23.877
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.114
CNS0095593Slightly white alabastrum(diploid) 224.937
CNS0095594Slightly white alabastrum(diploid) 324.446
CNS0095595Whole white alabastrum(diploid) 221.218
CNS0095596Whole white alabastrum(diploid) 39.396
CNS0095597Whole white alabastrum(diploid) 419.248
CNS0095598Silvery flower (diploied) 143.440
CNS0095599Silvery flower (diploied) 232.143
CNS0095600Silvery flower (diploied) 355.742
CNS0095601Golden flower (diploid) 134.373
CNS0095602Golden flower (diploid) 255.206
CNS0095603Golden flower (diploid) 350.155
CNS0095604Slightly white alabastrum(tetraploid) 117.958
CNS0095605Slightly white alabastrum(tetraploid) 214.028
CNS0095606Slightly white alabastrum(tetraploid) 332.405
CNS0095607Whole white alabastrum(tetraploid) 115.178
CNS0095608Whole white alabastrum(tetraploid) 210.295
CNS0095609Whole white alabastrum(tetraploid) 316.447
CNS0095610Silvery flower (tetraploid) 157.146
CNS0095611Silvery flower (tetraploid) 258.198
CNS0095612Silvery flower (tetraploid) 351.565
CNS0095613Golden flower (tetraploid) 136.522
CNS0095614Golden flower (tetraploid) 241.595
CNS0095615Golden flower (tetraploid) 348.253
CRA001975CRR073297Stem 136.130
CRR073298Stem 232.134
CRR073299Stem 333.350
CRR073300Leaf 132.027
CRR073301Leaf 234.050
CRR073302Leaf 325.385
CRR073303Juvenile bud 134.692
CRR073304Juvenile bud 226.278
CRR073305Juvenile bud 351.332
CRR073306Third green 137.814
CRR073307Third green 228.657
CRR073308Third green 336.980
CRR073309Second white 141.549
CRR073310Second white 246.953
CRR073311Second white 340.478
CRR073312Silver flowering 131.735
CRR073313Silver flowering 243.423
CRR073314Silver flowering 334.324
CRR073315Gold flowering 133.346
CRR073316Gold flowering 262.669
CRR073317Gold flowering 340.180
CRR073318Tawny withering 160.643
CRR073319Tawny withering 278.600
CRR073320Tawny withering 349.673