Detail information of GWHGAAZE016886


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006427801.10hypothetical protein CICLE_v10025879mg [Citrus clementina]
Swissprottr|B9RU15|ATXR5_RICCO0Probable Histone-lysine N-methyltransferase ATXR5 (Precursor)
trEMBLtr|V4SV45|V4SV45_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR41041.1}
TAIR10AT5G09790.23E-130ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8496270284969859-
GWHAAZE00000004mRNA8496270284969859-
GWHAAZE00000004exon8496270284962999-
GWHAAZE00000004exon8496390784964119-
GWHAAZE00000004exon8496421884964318-
GWHAAZE00000004exon8496481584965047-
GWHAAZE00000004exon8496871984968799-
GWHAAZE00000004exon8496952384969859-
GWHAAZE00000004CDS8496952384969859-
GWHAAZE00000004CDS8496871984968799-
GWHAAZE00000004CDS8496481584965047-
GWHAAZE00000004CDS8496421884964318-
GWHAAZE00000004CDS8496390784964119-
GWHAAZE00000004CDS8496284084962999-
GWHAAZE00000004three_prime_UTR8496270284962839-
Transcript Sequence

Network for GWHGAAZE016886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00628.30PHD601075.60E-11
PF00856.29SET2743622.70E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.737
SRR3591706second leaf3.192
SRR3591707mature leaf1.831
SRR3591708Shoot apex6.076
SRR3591709Stem4.184
SRR3591710White floral bud10.598
SRR3591711White flower6.170
SRR3591712Green floral bud10.831
SRR3591713Yellow flower4.279
SRP173429 SRR8316895Juvenile bud stage 5.664
SRR8316896Juvenile bud stage 6.734
SRR8316897Juvenile bud stage 5.128
SRR8316894Third green stage 4.142
SRR8316900Third green stage 10.586
SRR8316901Third green stage 8.500
SRR8316898Complete white stage 3.135
SRR8316899Complete white stage 6.788
SRR8316903Complete white stage 3.998
SRR8316902Silver flowering stage3.902
SRR8316904Silver flowering stage3.651
SRR8316905Silver flowering stage1.530
SRR8316906Gold flowering stage 4.849
SRR8316907Gold flowering stage 4.881
SRR8316908Gold flowering stage 4.970
SRP132670SRR6706286Control6.337
SRR6706287Light intensity 50%6.446
SRR6706288Light intensity 20%6.730
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.525
CNS0095593Slightly white alabastrum(diploid) 27.860
CNS0095594Slightly white alabastrum(diploid) 38.705
CNS0095595Whole white alabastrum(diploid) 213.467
CNS0095596Whole white alabastrum(diploid) 312.382
CNS0095597Whole white alabastrum(diploid) 415.372
CNS0095598Silvery flower (diploied) 15.809
CNS0095599Silvery flower (diploied) 26.061
CNS0095600Silvery flower (diploied) 35.811
CNS0095601Golden flower (diploid) 15.819
CNS0095602Golden flower (diploid) 25.110
CNS0095603Golden flower (diploid) 36.638
CNS0095604Slightly white alabastrum(tetraploid) 17.910
CNS0095605Slightly white alabastrum(tetraploid) 27.589
CNS0095606Slightly white alabastrum(tetraploid) 37.132
CNS0095607Whole white alabastrum(tetraploid) 111.845
CNS0095608Whole white alabastrum(tetraploid) 214.345
CNS0095609Whole white alabastrum(tetraploid) 38.745
CNS0095610Silvery flower (tetraploid) 13.531
CNS0095611Silvery flower (tetraploid) 24.850
CNS0095612Silvery flower (tetraploid) 36.944
CNS0095613Golden flower (tetraploid) 13.368
CNS0095614Golden flower (tetraploid) 23.454
CNS0095615Golden flower (tetraploid) 33.765
CRA001975CRR073297Stem 16.438
CRR073298Stem 26.294
CRR073299Stem 34.932
CRR073300Leaf 18.145
CRR073301Leaf 25.653
CRR073302Leaf 34.184
CRR073303Juvenile bud 16.177
CRR073304Juvenile bud 25.772
CRR073305Juvenile bud 34.585
CRR073306Third green 16.525
CRR073307Third green 25.653
CRR073308Third green 35.319
CRR073309Second white 14.211
CRR073310Second white 22.037
CRR073311Second white 33.375
CRR073312Silver flowering 14.243
CRR073313Silver flowering 24.784
CRR073314Silver flowering 35.157
CRR073315Gold flowering 12.844
CRR073316Gold flowering 22.171
CRR073317Gold flowering 32.179
CRR073318Tawny withering 13.847
CRR073319Tawny withering 21.839
CRR073320Tawny withering 33.571