Gene detail

Detail information of GWHGAAZE016981

Functional Annotation

Database	Orthologs	Annotation
Nr	AHB62409.1	L-myo-inositol-1-phosphate synthase [Actinidia eriantha]
Swissprot	tr\|Q9LW96\|INO1_TOBAC	Inositol-3-phosphate synthase
trEMBL	tr\|V5TCU6\|V5TCU6_ACTER	L-myo-inositol-1-phosphate synthase {ECO:0000313\|EMBL:AHB62409.1}
TAIR10	AT5G10170.1	myo-inositol-1-phosphate synthase 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	88379083	88384526	+
GWHAAZE00000004	mRNA	88379083	88384526	+
GWHAAZE00000004	exon	88379083	88379270	+
GWHAAZE00000004	exon	88379379	88379447	+
GWHAAZE00000004	exon	88380492	88380627	+
GWHAAZE00000004	exon	88381357	88381604	+
GWHAAZE00000004	exon	88382091	88382317	+
GWHAAZE00000004	exon	88382438	88382553	+
GWHAAZE00000004	exon	88382942	88383058	+
GWHAAZE00000004	exon	88383580	88383768	+
GWHAAZE00000004	exon	88384006	88384068	+
GWHAAZE00000004	exon	88384407	88384526	+
GWHAAZE00000004	CDS	88379083	88379270	+
GWHAAZE00000004	CDS	88379379	88379447	+
GWHAAZE00000004	CDS	88380492	88380627	+
GWHAAZE00000004	CDS	88381357	88381604	+
GWHAAZE00000004	CDS	88382091	88382317	+
GWHAAZE00000004	CDS	88382438	88382553	+
GWHAAZE00000004	CDS	88382942	88383058	+
GWHAAZE00000004	CDS	88383580	88383768	+
GWHAAZE00000004	CDS	88384006	88384068	+
GWHAAZE00000004	CDS	88384407	88384526	+

Transcript Sequence
>GWHTAAZE017001 ATGTTTATTGAGAGCTTTAAGGTAGAAAGCCCAAATGTTAAGTACACTGAGGGTGAGATACACTCTGTGTACAATTACGAGACCACTGAGCTTCTTCATGAGAACAAAAATGGTGCCTATCAGTGGACTGTTAAACCCAAATCTGTCAAATACGAGTTCAAGACTGATACCCATGTCCCCAAATTAGGGGTTATGCTTGTTGGGTGGGGAGGCAACAATGGTTCTACCCTTACTGCTGGTGTTATTGCTAATCGGGAGGGAATCTCTTGGGCAACAAAAGACAAGGTGCAACAAGCCAACTACTTTGGGTCACTCACCCAGGCCTCTACAATTCGAGTTGGGTCTTTCAATGGAGAGGAGATTTATGCTCCATTCAAGAGCTTGCTCCCCATGGTGAACCCAGATGACATAGTGTTTGGGGGATGGGACATAAGTAACATGAACTTGGCTGATGCCATGGCTAGGGCTAAGGTGTTGGACATTGACCTGCAGAAGCAGCTTAGGCCCTACATGGAATCCATGGTCCCACTCCCTGGAATCTACGACCCTGATTTCATCGCGGCCAACCAAGAGGCACGTGCCAACAACTTAATCAAAGGAACCAAGAAAGAGCAAGTTCAACAAGTCATCAAAGACATTAGGGAATTTAAGGAGGCGAACAAGGTGGATAAAGTAGTGGTTCTGTGGACAGCAAACACAGAGAGATACAGCAATATAATTGTAGGACTAAATGACACTGAAGAAAACCTATTTGCCTCTTTGGAGAAGAATGAAACAGAGATATCACCCTCCACCTTGTTTGGCATAGCTTGTGTTCTGGAAAACGTTCCTTTCATCAATGGAAGCCCACAGAACACTTTTGTTCCAGGGCTGATTGATTTGGCCATAAGGAGGAACAGTTTGATTGGTGGAGATGACTTTAAGAGCGGTCAGACCAAGATGAAGTCAGTACTTGTTGATTTTCTCGTTGGAGCCGGTATCAAGCTCCAAACCTTCCGTTCTAAGGAGATTTCCAAGAGCAATGTCGTGGATGACATGGTCTCGAGCAATGCCATCCTTTATGAGCCTGGCGAGCATCCTGACCATGTGGTTGTTATCAAGTACGTGCCGTATGTGGGAGATAGCAAAAGGGCTATGGACGAGTACACATCAGAGATATTCATGGGTGGTAAGAACACCATAGTTCTTCACAACACTTGCGAGGACTCACTCTTGGCCGCTCCCATCATCTTGGACCTTGTGCTCCTCGCCGAACTCAGCACTCGAATTCAGCTCAAAGCTGACGGAGAGGGTAAATTCCACTCATTCCACCCTGTGGCTACAATCCTGAGCTACCTCACCAAGGCTCCTCTTGTACCACCAGGCACGCCAGTGGTGAATGCGCTGGCGAAGCAGAGGGCGATGCTTGAGAACATACTGAGGGCTTGTGTTGGATTGGCTCCAGAGAACAACATGATTTTGGAATACAAATGA

Network for GWHGAAZE016981

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07994.13	NAD_binding_5	62	474	1.90E-140
PF01658.18	Inos-1-P_synth	330	403	1.30E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01858	INO1, ISYNA1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Inositol phosphate metabolism	map00562
		Streptomycin biosynthesis	map00521

Gene Ontology

GO term	Ontology	Name
GO:0006021	biological_process	inositol biosynthetic process
GO:0008654	biological_process	phospholipid biosynthetic process
GO:0004512	molecular_function	inositol-3-phosphate synthase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	47.490
	SRR3591706	second leaf	83.042
	SRR3591707	mature leaf	187.239
	SRR3591708	Shoot apex	86.278
	SRR3591709	Stem	52.624
	SRR3591710	White floral bud	47.744
	SRR3591711	White flower	36.319
	SRR3591712	Green floral bud	28.124
	SRR3591713	Yellow flower	7.729
SRP173429	SRR8316895	Juvenile bud stage	49.384
	SRR8316896	Juvenile bud stage	56.447
	SRR8316897	Juvenile bud stage	22.873
	SRR8316894	Third green stage	42.918
	SRR8316900	Third green stage	75.960
	SRR8316901	Third green stage	64.660
	SRR8316898	Complete white stage	29.633
	SRR8316899	Complete white stage	295.346
	SRR8316903	Complete white stage	66.526
	SRR8316902	Silver flowering stage	2.533
	SRR8316904	Silver flowering stage	6.322
	SRR8316905	Silver flowering stage	1.979
	SRR8316906	Gold flowering stage	3.002
	SRR8316907	Gold flowering stage	2.089
	SRR8316908	Gold flowering stage	2.286
SRP132670	SRR6706286	Control	105.148
	SRR6706287	Light intensity 50%	94.692
	SRR6706288	Light intensity 20%	82.785
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	22.676
	CNS0095593	Slightly white alabastrum(diploid) 2	30.545
	CNS0095594	Slightly white alabastrum(diploid) 3	20.093
	CNS0095595	Whole white alabastrum(diploid) 2	33.415
	CNS0095596	Whole white alabastrum(diploid) 3	15.785
	CNS0095597	Whole white alabastrum(diploid) 4	37.641
	CNS0095598	Silvery flower (diploied) 1	28.019
	CNS0095599	Silvery flower (diploied) 2	33.801
	CNS0095600	Silvery flower (diploied) 3	13.617
	CNS0095601	Golden flower (diploid) 1	73.656
	CNS0095602	Golden flower (diploid) 2	40.376
	CNS0095603	Golden flower (diploid) 3	36.793
	CNS0095604	Slightly white alabastrum(tetraploid) 1	57.325
	CNS0095605	Slightly white alabastrum(tetraploid) 2	36.963
	CNS0095606	Slightly white alabastrum(tetraploid) 3	153.475
	CNS0095607	Whole white alabastrum(tetraploid) 1	83.115
	CNS0095608	Whole white alabastrum(tetraploid) 2	55.781
	CNS0095609	Whole white alabastrum(tetraploid) 3	26.943
	CNS0095610	Silvery flower (tetraploid) 1	2.289
	CNS0095611	Silvery flower (tetraploid) 2	18.308
	CNS0095612	Silvery flower (tetraploid) 3	3.529
	CNS0095613	Golden flower (tetraploid) 1	0.929
	CNS0095614	Golden flower (tetraploid) 2	1.820
	CNS0095615	Golden flower (tetraploid) 3	0.642
CRA001975	CRR073297	Stem 1	69.339
	CRR073298	Stem 2	55.539
	CRR073299	Stem 3	70.507
	CRR073300	Leaf 1	109.016
	CRR073301	Leaf 2	93.006
	CRR073302	Leaf 3	63.231
	CRR073303	Juvenile bud 1	220.077
	CRR073304	Juvenile bud 2	129.008
	CRR073305	Juvenile bud 3	333.451
	CRR073306	Third green 1	10.825
	CRR073307	Third green 2	11.509
	CRR073308	Third green 3	16.851
	CRR073309	Second white 1	0.397
	CRR073310	Second white 2	2.422
	CRR073311	Second white 3	0.470
	CRR073312	Silver flowering 1	0.135
	CRR073313	Silver flowering 2	0.168
	CRR073314	Silver flowering 3	0.120
	CRR073315	Gold flowering 1	6.216
	CRR073316	Gold flowering 2	6.250
	CRR073317	Gold flowering 3	6.728
	CRR073318	Tawny withering 1	9.260
	CRR073319	Tawny withering 2	1.807
	CRR073320	Tawny withering 3	6.784