Detail information of GWHGAAZE017011


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010048109.14.0334E-107PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Eucalyptus grandis]
Swissprottr|Q943I6|STOP1_ORYSJ5E-76Zinc finger protein STOP1 homolog
trEMBLtr|A0A059CP40|A0A059CP40_EUCGR2E-107Uncharacterized protein {ECO:0000313|EMBL:KCW80243.1}
TAIR10AT1G34370.27E-62C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8936004889360755+
GWHAAZE00000004mRNA8936004889360755+
GWHAAZE00000004exon8936004889360755+
GWHAAZE00000004CDS8936004889360755+
Transcript Sequence

Network for GWHGAAZE017011

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.27zf-C2H222439.10E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.534
SRR3591706second leaf16.078
SRR3591707mature leaf23.329
SRR3591708Shoot apex30.407
SRR3591709Stem42.203
SRR3591710White floral bud26.640
SRR3591711White flower51.239
SRR3591712Green floral bud28.873
SRR3591713Yellow flower63.843
SRP173429 SRR8316895Juvenile bud stage 13.652
SRR8316896Juvenile bud stage 17.202
SRR8316897Juvenile bud stage 6.344
SRR8316894Third green stage 6.530
SRR8316900Third green stage 23.689
SRR8316901Third green stage 22.876
SRR8316898Complete white stage 8.486
SRR8316899Complete white stage 34.354
SRR8316903Complete white stage 10.366
SRR8316902Silver flowering stage18.569
SRR8316904Silver flowering stage17.148
SRR8316905Silver flowering stage8.969
SRR8316906Gold flowering stage 42.090
SRR8316907Gold flowering stage 27.555
SRR8316908Gold flowering stage 41.279
SRP132670SRR6706286Control27.440
SRR6706287Light intensity 50%29.152
SRR6706288Light intensity 20%28.929
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.129
CNS0095593Slightly white alabastrum(diploid) 225.205
CNS0095594Slightly white alabastrum(diploid) 329.147
CNS0095595Whole white alabastrum(diploid) 220.291
CNS0095596Whole white alabastrum(diploid) 317.941
CNS0095597Whole white alabastrum(diploid) 421.972
CNS0095598Silvery flower (diploied) 123.444
CNS0095599Silvery flower (diploied) 221.085
CNS0095600Silvery flower (diploied) 329.628
CNS0095601Golden flower (diploid) 126.263
CNS0095602Golden flower (diploid) 226.826
CNS0095603Golden flower (diploid) 327.606
CNS0095604Slightly white alabastrum(tetraploid) 119.217
CNS0095605Slightly white alabastrum(tetraploid) 216.614
CNS0095606Slightly white alabastrum(tetraploid) 327.205
CNS0095607Whole white alabastrum(tetraploid) 115.490
CNS0095608Whole white alabastrum(tetraploid) 212.282
CNS0095609Whole white alabastrum(tetraploid) 323.758
CNS0095610Silvery flower (tetraploid) 120.993
CNS0095611Silvery flower (tetraploid) 219.051
CNS0095612Silvery flower (tetraploid) 321.463
CNS0095613Golden flower (tetraploid) 123.697
CNS0095614Golden flower (tetraploid) 229.585
CNS0095615Golden flower (tetraploid) 326.211
CRA001975CRR073297Stem 125.758
CRR073298Stem 225.838
CRR073299Stem 327.504
CRR073300Leaf 132.067
CRR073301Leaf 233.697
CRR073302Leaf 334.044
CRR073303Juvenile bud 137.426
CRR073304Juvenile bud 237.349
CRR073305Juvenile bud 329.962
CRR073306Third green 127.941
CRR073307Third green 223.434
CRR073308Third green 322.739
CRR073309Second white 130.297
CRR073310Second white 236.306
CRR073311Second white 327.717
CRR073312Silver flowering 149.920
CRR073313Silver flowering 254.617
CRR073314Silver flowering 343.600
CRR073315Gold flowering 114.590
CRR073316Gold flowering 214.899
CRR073317Gold flowering 313.355
CRR073318Tawny withering 123.471
CRR073319Tawny withering 220.882
CRR073320Tawny withering 319.221