Detail information of GWHGAAZE017129


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007012499.16.08153E-71Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme [Theobroma cacao]
Swissprottr|Q9SMZ4|AASS_ARATH1E-59Saccharopine dehydrogenase
trEMBLtr|A0A061GL41|A0A061GL41_THECC2E-71Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme {ECO:0000313|EMBL:EOY30118.1}
TAIR10AT4G33150.21E-52lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene9233035492332474+
GWHAAZE00000004mRNA9233035492332474+
GWHAAZE00000004exon9233035492330410+
GWHAAZE00000004exon9233057092330710+
GWHAAZE00000004exon9233211892332474+
GWHAAZE00000004CDS9233035492330410+
GWHAAZE00000004CDS9233057092330710+
GWHAAZE00000004CDS9233211892332474+
Transcript Sequence

Network for GWHGAAZE017129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04455.13Saccharop_dh_N19913.20E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14157AASS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Lysine degradationmap00310

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.108
SRR3591706second leaf4.796
SRR3591707mature leaf4.275
SRR3591708Shoot apex7.508
SRR3591709Stem43.602
SRR3591710White floral bud77.469
SRR3591711White flower43.898
SRR3591712Green floral bud43.744
SRR3591713Yellow flower91.796
SRP173429 SRR8316895Juvenile bud stage 36.092
SRR8316896Juvenile bud stage 43.527
SRR8316897Juvenile bud stage 23.062
SRR8316894Third green stage 14.614
SRR8316900Third green stage 59.895
SRR8316901Third green stage 43.570
SRR8316898Complete white stage 65.797
SRR8316899Complete white stage 96.807
SRR8316903Complete white stage 124.568
SRR8316902Silver flowering stage29.320
SRR8316904Silver flowering stage44.940
SRR8316905Silver flowering stage19.802
SRR8316906Gold flowering stage 60.262
SRR8316907Gold flowering stage 39.258
SRR8316908Gold flowering stage 40.153
SRP132670SRR6706286Control46.703
SRR6706287Light intensity 50%43.427
SRR6706288Light intensity 20%49.419
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.897
CNS0095593Slightly white alabastrum(diploid) 28.848
CNS0095594Slightly white alabastrum(diploid) 321.262
CNS0095595Whole white alabastrum(diploid) 210.938
CNS0095596Whole white alabastrum(diploid) 317.609
CNS0095597Whole white alabastrum(diploid) 419.331
CNS0095598Silvery flower (diploied) 141.688
CNS0095599Silvery flower (diploied) 251.267
CNS0095600Silvery flower (diploied) 3292.189
CNS0095601Golden flower (diploid) 174.593
CNS0095602Golden flower (diploid) 2261.023
CNS0095603Golden flower (diploid) 3259.343
CNS0095604Slightly white alabastrum(tetraploid) 113.585
CNS0095605Slightly white alabastrum(tetraploid) 28.484
CNS0095606Slightly white alabastrum(tetraploid) 324.163
CNS0095607Whole white alabastrum(tetraploid) 110.128
CNS0095608Whole white alabastrum(tetraploid) 27.895
CNS0095609Whole white alabastrum(tetraploid) 360.563
CNS0095610Silvery flower (tetraploid) 1165.995
CNS0095611Silvery flower (tetraploid) 2324.058
CNS0095612Silvery flower (tetraploid) 3256.868
CNS0095613Golden flower (tetraploid) 162.561
CNS0095614Golden flower (tetraploid) 2141.392
CNS0095615Golden flower (tetraploid) 3377.765
CRA001975CRR073297Stem 155.377
CRR073298Stem 235.034
CRR073299Stem 343.355
CRR073300Leaf 148.953
CRR073301Leaf 233.240
CRR073302Leaf 335.108
CRR073303Juvenile bud 134.477
CRR073304Juvenile bud 244.332
CRR073305Juvenile bud 346.675
CRR073306Third green 137.216
CRR073307Third green 221.104
CRR073308Third green 332.469
CRR073309Second white 139.399
CRR073310Second white 238.934
CRR073311Second white 344.027
CRR073312Silver flowering 151.442
CRR073313Silver flowering 239.227
CRR073314Silver flowering 360.371
CRR073315Gold flowering 13.023
CRR073316Gold flowering 23.208
CRR073317Gold flowering 31.478
CRR073318Tawny withering 15.884
CRR073319Tawny withering 26.654
CRR073320Tawny withering 38.515