Gene detail

Detail information of GWHGAAZE017219

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011035514.1	PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
Swissprot	tr\|Q43128\|PMA10_ARATH	ATPase 10, plasma membrane-type
trEMBL	tr\|A5ALY9\|A5ALY9_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN80223.1}
TAIR10	AT1G17260.1	autoinhibited H(+)-ATPase isoform 10

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	2722308	2734461	+
GWHAAZE00000005	mRNA	2722308	2734461	+
GWHAAZE00000005	exon	2722308	2722325	+
GWHAAZE00000005	exon	2722579	2722661	+
GWHAAZE00000005	exon	2722753	2722872	+
GWHAAZE00000005	exon	2723463	2723561	+
GWHAAZE00000005	exon	2723719	2723856	+
GWHAAZE00000005	exon	2724327	2724402	+
GWHAAZE00000005	exon	2724518	2724768	+
GWHAAZE00000005	exon	2726381	2726587	+
GWHAAZE00000005	exon	2726874	2726993	+
GWHAAZE00000005	exon	2727742	2727861	+
GWHAAZE00000005	exon	2727947	2728069	+
GWHAAZE00000005	exon	2728648	2728752	+
GWHAAZE00000005	exon	2728923	2729067	+
GWHAAZE00000005	exon	2729459	2729620	+
GWHAAZE00000005	exon	2731959	2732197	+
GWHAAZE00000005	exon	2732515	2732547	+
GWHAAZE00000005	exon	2732671	2732752	+
GWHAAZE00000005	exon	2732973	2733133	+
GWHAAZE00000005	exon	2733235	2733408	+
GWHAAZE00000005	exon	2733640	2733822	+
GWHAAZE00000005	exon	2733950	2734120	+
GWHAAZE00000005	exon	2734231	2734461	+
GWHAAZE00000005	five_prime_UTR	2722308	2722325	+
GWHAAZE00000005	five_prime_UTR	2722579	2722595	+
GWHAAZE00000005	CDS	2722596	2722661	+
GWHAAZE00000005	CDS	2722753	2722872	+
GWHAAZE00000005	CDS	2723463	2723561	+
GWHAAZE00000005	CDS	2723719	2723856	+
GWHAAZE00000005	CDS	2724327	2724402	+
GWHAAZE00000005	CDS	2724518	2724768	+
GWHAAZE00000005	CDS	2726381	2726587	+
GWHAAZE00000005	CDS	2726874	2726993	+
GWHAAZE00000005	CDS	2727742	2727861	+
GWHAAZE00000005	CDS	2727947	2728069	+
GWHAAZE00000005	CDS	2728648	2728752	+
GWHAAZE00000005	CDS	2728923	2729067	+
GWHAAZE00000005	CDS	2729459	2729620	+
GWHAAZE00000005	CDS	2731959	2732197	+
GWHAAZE00000005	CDS	2732515	2732547	+
GWHAAZE00000005	CDS	2732671	2732752	+
GWHAAZE00000005	CDS	2732973	2733133	+
GWHAAZE00000005	CDS	2733235	2733408	+
GWHAAZE00000005	CDS	2733640	2733822	+
GWHAAZE00000005	CDS	2733950	2734120	+
GWHAAZE00000005	CDS	2734231	2734461	+

Transcript Sequence
>GWHTAAZE017239 ATGATCAGTACTACACAAGTTTTGAAGCTGGAAACATGGCCGAAGATCTCCAGAAACCATTGTTGGGTCCCGACAATTTCAGCAGAGAGGGGATTGATCTGGAACGCCTACCGTTGGAAGAGGTTTTTGAACAACTAAGAACATCAGGAGCAGGACTTTCATCTGAAGATGCCGAGGCCCGATTGAAGATATTTGGCCAAAACAAGCTCGAAGAGAAGCCTGAGAACAAATTTTTAAAATTTCTTAGTTTCATGTGGAATCCCTTGTCATGGGTTATGGAAGCTGCTGCAGTGATGGCAATTGCTCTCGCTAATGGTGGGGGGCAGGGTCCTGACTGGCAGGACTTTGCTGGGATTGTTTGCTTGTTGATAATCAATTCGACCATTAGTTTTATAGAGGAAAATAATGCTGGGAATGCTGCATCAGCCCTTATGGCACGTCTAGCTCCGAAAACAAAGGTGCTCAGAGATGGGCATTGGCTAGAACATGATGCAGCTCTGCTAGTCCCAGGAGACATTATTAGTATAAAGCTTGGTCTCCCTCAAGAAAAAATTGGTTGCCGGTACAGGTTCCGAAATTATCTGATTGAGGTTTTCTTGTTGCAGTCAGCTCTTACCGGAGAATCTTTGCCTGTCACCAAGAGAACAGGGGACGAAGTTTTTTCTGGTTCAACATGTAAACATGGGGAGATTGAAGCAGTAGTAATAGCAACGGGAGTTCACTCTTTCTTTGGAAAAGCAGCACATTTAGTTGACTCGACTGAAGTTGTTGGTCATTTCCAGAAGGTCCTCACTGCTATTGGGAACTTCTGCATTTGCTCTATTGCTGTGGGAATGATTCTTGAAATCATCGTCATGTACCCTATCCAGCACCGCTCATATAGAAGTGGAATCAACAACCTTCTGGTGCTTTTAATTGGAGGAATACCCATAGCTATGCCGACAGTATTATCTGTCACACTTGCCATTGGTTCTCATCGGCTATCTCAACAAGGTGCCATTACAAAGAGGATGACAGCAATTGAAGAAATGGCTGGAATGGATGTCCTCTGCAGTGATAAAACTGGAACCCTTACACTGAATCGCCTAACTGTTGATCGAAACCTTATTGAGGTCTTTGCGAAAGATATGGACAAGGACATGGTTGTCTTGCTTGCAGCCAGAGCATCAAGACTGGAGAACCAGGATGCTATTGATGCAGCCATCGTAAACATGCTTGCTGATCCGAAAGAGGCACGTGCAAATATCATAGAAGTGCACTTCCTTCCCTTTAATCCAGTGGACAAGCGTACTGCCCTTACATACATTGATCTTGATGGTACATGGTATCGAGCCAGCAAAGGAGCTCCTGAACGGATTCTGGATCTGTGCGAAGAGAAACAAGAGATAGCTGGAAAAGTCCATACCATAATTGACAAGTTTGCTGAAAGGGGCTTACGTTCTCTTGGAGTTGCCTTGCAGGAAGTTCCAGAAAAATCGAAGGAGAGCCCTGGAGGGCCTTGGACATTTTCTGGGTTGCTGCCTTTGTTTGATCCTCCTAGACATGATAGTGCTGAGACTATTCGCAGAGCACTTAATCTTGGGGTTTGTGTAAAGATGATTACAGGTGATCAGTTGGCAATTGCAAAGGAGACAGGTCGACGACTCGGCATGGGAACTAATATGTACCCCTCTTCATCATTGTTGGGCCATAGCAAAGTTGACCATGAAGTTCTTCCGGTGGATGAGCTTATTGAAAAGGCAGATGGCTTTGCTGGTGTATTCCCTGAACACAAGTATGAAATTGTAAAGATTTTACAAGAAAAAAAGCATGTCTGTGGGATGACTGGGGATGGTGTGAATGATGCACCTGCTTTGAAGAAAGCAGATATTGGAATAGCAGTTGCAGATGCTACAGATGCTGCTAGAAGCGCTGCTGATATCGTCTTAACAGAGCCTGGCTTAAGTGTGATTATCAGTGCAGTTTTAACTAGTCGGGCTATATTTCAAAGAATGAAGAACTATACAATTTACGCAGTCTCCATAACTATTCGGATTGTGCTTGGATTTACACTACTAGCATTGATATGGGAGTATGACTTCCCGCCTTTCATGGTTCTAATAATTGCTATACTCAATGATGGTACCATCATGACTATTTCCAAAGATAGAGTGAAGCCGTCCCCTAAGCCTGACAGTTGGAAGCTTAATGAGATATTTGCAACAGGCGTTGTCATTGGCACTTATCTTGCTTTAATTACTGTCTTATTTTACTGGGTTGCTGAAGGCACCAATTTCTTTGAGACCCACTTCAAAGTGAGGTCCATATCTGGCAATACTGAGGAAATCTCATCTGCCATATATCTGCAAGTCAGCATTATCAGCCAGGCTCTCATCTTTGTTACGCGTAGTCAAAGCTGGTCATTTGTGGAAAGGCCCGGGACTCTCCTGATGTGTGCATTCGTTGTGGCACAATTGGTTGCTACCATGATCGCAGTCTATGCAGATATTAGCTTTGCGTCAATTAGTGGCATTGGGTGGGGATGGGCAGGTGTTATATGGTTATATAGTCTCATCTTCTATGTTCCCCTGGATATTATCAAGTTTGCAATTCGCTATGCTTTGAGTGGAGAGGCCTGGAATCTAGTATTCGATAGGAAGACGGCCTTTACATCTAAAAAGGATTACGGTAAGGAAGATAGGGAGGCTAAGTGGGTACTTTCTCAAAGGACTCTACAAGGATTAATGTCTTCAGAGTGGGACGTTCATGGAAGGAGGTCTTCTCTAATTGCCGAGCAGGCCAGAAGACGTGCTGAAATAGCTAGGTGCTGGGCTTGGGGAGCTTCACACACTGAGAGGACATATAGAATCAGTAGTGAGGCTCAAACACTTAGACTTGAGCGGGATCCAAGCAGCTCATACAGTTTGAAGGTGTGCTATGCACAAGGAAGATTTAATGTTTACTACCACCTACAATTGCATATGCCAAGGAAGAGACATGTCAAGCAGTTGTTGGGAATAGCGATGGCGAAAATCAACATCCTAGAATTTTTTGGCTCATAA

Network for GWHGAAZE017219

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0093

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00690.27	Cation_ATPase_N	24	87	4.90E-14
PF00122.21	E1-E2_ATPase	136	318	9.30E-35
PF00702.27	Hydrolase	335	611	7.80E-17

Protein Sequence

>GWHPAAZE017229
MAEDLQKPLLGPDNFSREGIDLERLPLEEVFEQLRTSGAGLSSEDAEARLKIFGQNKLEEKPENKFLKFLSFMWNPLSWVMEAAAVMAIALANGGGQGPDWQDFAGIVCLLIINSTISFIEENNAGNAASALMARLAPKTKVLRDGHWLEHDAALLVPGDIISIKLGLPQEKIGCRYRFRNYLIEVFLLQSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTAIGNFCICSIAVGMILEIIVMYPIQHRSYRSGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFAKDMDKDMVVLLAARASRLENQDAIDAAIVNMLADPKEARANIIEVHFLPFNPVDKRTALTYIDLDGTWYRASKGAPERILDLCEEKQEIAGKVHTIIDKFAERGLRSLGVALQEVPEKSKESPGGPWTFSGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHSKVDHEVLPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVCGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLNEIFATGVVIGTYLALITVLFYWVAEGTNFFETHFKVRSISGNTEEISSAIYLQVSIISQALIFVTRSQSWSFVERPGTLLMCAFVVAQLVATMIAVYADISFASISGIGWGWAGVIWLYSLIFYVPLDIIKFAIRYALSGEAWNLVFDRKTAFTSKKDYGKEDREAKWVLSQRTLQGLMSSEWDVHGRRSSLIAEQARRRAEIARCWAWGASHTERTYRISSEAQTLRLERDPSSSYSLKVCYAQGRFNVYYHLQLHMPRKRHVKQLLGIAMAKINILEFFGS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01535	PMA1, PMA2	Metabolic pathways	map01100
K01535	PMA1, PMA2	Oxidative phosphorylation	map00190

Gene Ontology

GO term	Ontology	Name
GO:0120029	biological_process	proton export across plasma membrane
GO:0016021	cellular_component	integral component of membrane
GO:0008553	molecular_function	proton-exporting ATPase activity, phosphorylative mechanism
GO:0000166	molecular_function	nucleotide binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.960
	SRR3591706	second leaf	0.106
	SRR3591707	mature leaf	0.394
	SRR3591708	Shoot apex	1.203
	SRR3591709	Stem	19.704
	SRR3591710	White floral bud	4.319
	SRR3591711	White flower	2.930
	SRR3591712	Green floral bud	6.287
	SRR3591713	Yellow flower	0.124
SRP173429	SRR8316895	Juvenile bud stage	6.384
	SRR8316896	Juvenile bud stage	7.304
	SRR8316897	Juvenile bud stage	3.674
	SRR8316894	Third green stage	4.024
	SRR8316900	Third green stage	7.213
	SRR8316901	Third green stage	6.982
	SRR8316898	Complete white stage	0.806
	SRR8316899	Complete white stage	5.825
	SRR8316903	Complete white stage	2.890
	SRR8316902	Silver flowering stage	0.231
	SRR8316904	Silver flowering stage	0.404
	SRR8316905	Silver flowering stage	0.225
	SRR8316906	Gold flowering stage	0.216
	SRR8316907	Gold flowering stage	0.712
	SRR8316908	Gold flowering stage	1.113
SRP132670	SRR6706286	Control	6.528
	SRR6706287	Light intensity 50%	6.765
	SRR6706288	Light intensity 20%	7.662
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.371
	CNS0095593	Slightly white alabastrum(diploid) 2	8.037
	CNS0095594	Slightly white alabastrum(diploid) 3	16.545
	CNS0095595	Whole white alabastrum(diploid) 2	10.215
	CNS0095596	Whole white alabastrum(diploid) 3	6.760
	CNS0095597	Whole white alabastrum(diploid) 4	10.687
	CNS0095598	Silvery flower (diploied) 1	7.672
	CNS0095599	Silvery flower (diploied) 2	5.763
	CNS0095600	Silvery flower (diploied) 3	2.295
	CNS0095601	Golden flower (diploid) 1	12.260
	CNS0095602	Golden flower (diploid) 2	3.597
	CNS0095603	Golden flower (diploid) 3	3.343
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.813
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.301
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.999
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.239
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.736
	CNS0095609	Whole white alabastrum(tetraploid) 3	10.360
	CNS0095610	Silvery flower (tetraploid) 1	0.653
	CNS0095611	Silvery flower (tetraploid) 2	1.658
	CNS0095612	Silvery flower (tetraploid) 3	1.097
	CNS0095613	Golden flower (tetraploid) 1	0.109
	CNS0095614	Golden flower (tetraploid) 2	0.219
	CNS0095615	Golden flower (tetraploid) 3	0.160
CRA001975	CRR073297	Stem 1	4.930
	CRR073298	Stem 2	4.595
	CRR073299	Stem 3	2.859
	CRR073300	Leaf 1	3.438
	CRR073301	Leaf 2	2.553
	CRR073302	Leaf 3	2.819
	CRR073303	Juvenile bud 1	3.863
	CRR073304	Juvenile bud 2	2.157
	CRR073305	Juvenile bud 3	5.317
	CRR073306	Third green 1	2.267
	CRR073307	Third green 2	0.499
	CRR073308	Third green 3	2.145
	CRR073309	Second white 1	0.356
	CRR073310	Second white 2	0.016
	CRR073311	Second white 3	0.087
	CRR073312	Silver flowering 1	0.206
	CRR073313	Silver flowering 2	0.193
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.291
	CRR073316	Gold flowering 2	0.520
	CRR073317	Gold flowering 3	0.361
	CRR073318	Tawny withering 1	3.286
	CRR073319	Tawny withering 2	3.241
	CRR073320	Tawny withering 3	2.424