Detail information of GWHGAAZE017299


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009795173.10PREDICTED: casein kinase I isoform delta-like [Nicotiana sylvestris]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|M0ZRQ6|M0ZRQ6_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400006625}
TAIR10AT1G72710.10casein kinase 1-like protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene41052964118713-
GWHAAZE00000005mRNA41052964118713-
GWHAAZE00000005exon41186384118713-
GWHAAZE00000005exon41184474118487-
GWHAAZE00000005exon41173834117452-
GWHAAZE00000005exon41171184117266-
GWHAAZE00000005exon41169184117013-
GWHAAZE00000005exon41167634116833-
GWHAAZE00000005exon41162404116301-
GWHAAZE00000005exon41160534116116-
GWHAAZE00000005exon41158804115964-
GWHAAZE00000005exon41129624113088-
GWHAAZE00000005exon41127884112870-
GWHAAZE00000005exon41126404112703-
GWHAAZE00000005exon41123184112453-
GWHAAZE00000005exon41122024112247-
GWHAAZE00000005exon41052964105583-
GWHAAZE00000005CDS41186384118713-
GWHAAZE00000005CDS41184474118487-
GWHAAZE00000005CDS41173834117452-
GWHAAZE00000005CDS41171184117266-
GWHAAZE00000005CDS41169184117013-
GWHAAZE00000005CDS41167634116833-
GWHAAZE00000005CDS41162404116301-
GWHAAZE00000005CDS41160534116116-
GWHAAZE00000005CDS41158804115964-
GWHAAZE00000005CDS41129624113088-
GWHAAZE00000005CDS41127884112870-
GWHAAZE00000005CDS41126404112703-
GWHAAZE00000005CDS41123184112453-
GWHAAZE00000005CDS41122024112247-
GWHAAZE00000005CDS41052964105583-
Transcript Sequence

Network for GWHGAAZE017299

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0235


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase102278.90E-26
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1

KEGG pathway

KO Enzyme pathway mapID
K02218CSNK1, CKI MAPK signaling pathway - yeast map04011
Hippo signaling pathway - multiple speciesmap04392

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf77.608
SRR3591706second leaf37.094
SRR3591707mature leaf51.476
SRR3591708Shoot apex62.366
SRR3591709Stem82.528
SRR3591710White floral bud114.018
SRR3591711White flower106.342
SRR3591712Green floral bud123.664
SRR3591713Yellow flower112.900
SRP173429 SRR8316895Juvenile bud stage 59.807
SRR8316896Juvenile bud stage 97.473
SRR8316897Juvenile bud stage 49.195
SRR8316894Third green stage 35.452
SRR8316900Third green stage 104.610
SRR8316901Third green stage 116.618
SRR8316898Complete white stage 38.159
SRR8316899Complete white stage 107.661
SRR8316903Complete white stage 59.459
SRR8316902Silver flowering stage48.278
SRR8316904Silver flowering stage72.146
SRR8316905Silver flowering stage29.623
SRR8316906Gold flowering stage 107.928
SRR8316907Gold flowering stage 114.023
SRR8316908Gold flowering stage 113.861
SRP132670SRR6706286Control73.932
SRR6706287Light intensity 50%68.190
SRR6706288Light intensity 20%68.782
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1116.803
CNS0095593Slightly white alabastrum(diploid) 298.689
CNS0095594Slightly white alabastrum(diploid) 3124.048
CNS0095595Whole white alabastrum(diploid) 2123.581
CNS0095596Whole white alabastrum(diploid) 3149.686
CNS0095597Whole white alabastrum(diploid) 4140.662
CNS0095598Silvery flower (diploied) 163.882
CNS0095599Silvery flower (diploied) 262.534
CNS0095600Silvery flower (diploied) 3106.774
CNS0095601Golden flower (diploid) 161.168
CNS0095602Golden flower (diploid) 299.576
CNS0095603Golden flower (diploid) 395.321
CNS0095604Slightly white alabastrum(tetraploid) 1146.877
CNS0095605Slightly white alabastrum(tetraploid) 2147.063
CNS0095606Slightly white alabastrum(tetraploid) 389.503
CNS0095607Whole white alabastrum(tetraploid) 1177.761
CNS0095608Whole white alabastrum(tetraploid) 2158.675
CNS0095609Whole white alabastrum(tetraploid) 3124.123
CNS0095610Silvery flower (tetraploid) 1104.780
CNS0095611Silvery flower (tetraploid) 292.853
CNS0095612Silvery flower (tetraploid) 3109.873
CNS0095613Golden flower (tetraploid) 174.595
CNS0095614Golden flower (tetraploid) 293.227
CNS0095615Golden flower (tetraploid) 3119.081
CRA001975CRR073297Stem 162.716
CRR073298Stem 265.645
CRR073299Stem 351.752
CRR073300Leaf 179.387
CRR073301Leaf 278.474
CRR073302Leaf 354.871
CRR073303Juvenile bud 168.724
CRR073304Juvenile bud 255.747
CRR073305Juvenile bud 354.774
CRR073306Third green 151.351
CRR073307Third green 247.066
CRR073308Third green 351.032
CRR073309Second white 143.100
CRR073310Second white 259.654
CRR073311Second white 344.980
CRR073312Silver flowering 148.638
CRR073313Silver flowering 247.312
CRR073314Silver flowering 343.879
CRR073315Gold flowering 130.646
CRR073316Gold flowering 238.406
CRR073317Gold flowering 320.068
CRR073318Tawny withering 160.909
CRR073319Tawny withering 264.941
CRR073320Tawny withering 357.226