Detail information of GWHGAAZE017322


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002527399.12.00768E-27LOB domain-containing protein, putative [Ricinus communis]
Swissprottr|Q9LRW1|LBD22_ARATH2E-17LOB domain-containing protein 22
trEMBLtr|B9SN30|B9SN30_RICCO7E-28LOB domain-containing protein, putative {ECO:0000313|EMBL:EEF34965.1}
TAIR10AT3G13850.12E-12LOB domain-containing protein 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene44498944450460+
GWHAAZE00000005mRNA44498944450460+
GWHAAZE00000005exon44498944450460+
GWHAAZE00000005CDS44498944450460+
Transcript Sequence

Network for GWHGAAZE017322

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB1395.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.214
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.507
SRR3591709Stem0.132
SRR3591710White floral bud22.481
SRR3591711White flower0.686
SRR3591712Green floral bud44.101
SRR3591713Yellow flower0.141
SRP173429 SRR8316895Juvenile bud stage 2.134
SRR8316896Juvenile bud stage 5.461
SRR8316897Juvenile bud stage 6.630
SRR8316894Third green stage 1.971
SRR8316900Third green stage 20.777
SRR8316901Third green stage 13.297
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.321
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.803
SRR8316904Silver flowering stage0.802
SRR8316905Silver flowering stage0.235
SRR8316906Gold flowering stage 0.100
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control9.729
SRR6706287Light intensity 50%9.484
SRR6706288Light intensity 20%8.220
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.507
CNS0095593Slightly white alabastrum(diploid) 26.992
CNS0095594Slightly white alabastrum(diploid) 313.654
CNS0095595Whole white alabastrum(diploid) 228.637
CNS0095596Whole white alabastrum(diploid) 335.875
CNS0095597Whole white alabastrum(diploid) 430.452
CNS0095598Silvery flower (diploied) 11.786
CNS0095599Silvery flower (diploied) 25.145
CNS0095600Silvery flower (diploied) 31.406
CNS0095601Golden flower (diploid) 11.986
CNS0095602Golden flower (diploid) 21.416
CNS0095603Golden flower (diploid) 30.812
CNS0095604Slightly white alabastrum(tetraploid) 145.492
CNS0095605Slightly white alabastrum(tetraploid) 241.220
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 159.034
CNS0095608Whole white alabastrum(tetraploid) 272.471
CNS0095609Whole white alabastrum(tetraploid) 338.029
CNS0095610Silvery flower (tetraploid) 10.513
CNS0095611Silvery flower (tetraploid) 22.008
CNS0095612Silvery flower (tetraploid) 33.459
CNS0095613Golden flower (tetraploid) 10.863
CNS0095614Golden flower (tetraploid) 20.505
CNS0095615Golden flower (tetraploid) 33.436
CRA001975CRR073297Stem 12.158
CRR073298Stem 23.821
CRR073299Stem 32.061
CRR073300Leaf 112.023
CRR073301Leaf 29.756
CRR073302Leaf 38.825
CRR073303Juvenile bud 123.026
CRR073304Juvenile bud 229.654
CRR073305Juvenile bud 31.675
CRR073306Third green 17.697
CRR073307Third green 213.928
CRR073308Third green 312.878
CRR073309Second white 11.737
CRR073310Second white 21.970
CRR073311Second white 31.693
CRR073312Silver flowering 110.366
CRR073313Silver flowering 29.458
CRR073314Silver flowering 33.905
CRR073315Gold flowering 116.206
CRR073316Gold flowering 24.510
CRR073317Gold flowering 38.461
CRR073318Tawny withering 112.326
CRR073319Tawny withering 28.212
CRR073320Tawny withering 313.839