Detail information of GWHGAAZE017395


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002284282.12.47117E-43PREDICTED: auxin-responsive protein IAA27-like [Vitis vinifera]
Swissprottr|Q9ZSY8|IAA27_ARATH4E-14Auxin-responsive protein IAA27
trEMBLtr|A0A067KYE4|A0A067KYE4_JATCU8E-40Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT4G29080.10.002phytochrome-associated protein 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene56266965627271-
GWHAAZE00000005mRNA56266965627271-
GWHAAZE00000005exon56266965627271-
GWHAAZE00000005CDS56266965627271-
Transcript Sequence

Network for GWHGAAZE017395

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf161.459
SRR3591706second leaf30.752
SRR3591707mature leaf10.057
SRR3591708Shoot apex93.842
SRR3591709Stem115.547
SRR3591710White floral bud29.813
SRR3591711White flower41.268
SRR3591712Green floral bud28.869
SRR3591713Yellow flower1.020
SRP173429 SRR8316895Juvenile bud stage 37.068
SRR8316896Juvenile bud stage 30.702
SRR8316897Juvenile bud stage 14.423
SRR8316894Third green stage 15.849
SRR8316900Third green stage 35.161
SRR8316901Third green stage 26.711
SRR8316898Complete white stage 2.305
SRR8316899Complete white stage 66.188
SRR8316903Complete white stage 15.422
SRR8316902Silver flowering stage0.712
SRR8316904Silver flowering stage2.444
SRR8316905Silver flowering stage0.990
SRR8316906Gold flowering stage 0.767
SRR8316907Gold flowering stage 1.447
SRR8316908Gold flowering stage 1.999
SRP132670SRR6706286Control28.095
SRR6706287Light intensity 50%28.394
SRR6706288Light intensity 20%30.069
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.623
CNS0095593Slightly white alabastrum(diploid) 249.343
CNS0095594Slightly white alabastrum(diploid) 317.185
CNS0095595Whole white alabastrum(diploid) 237.030
CNS0095596Whole white alabastrum(diploid) 34.739
CNS0095597Whole white alabastrum(diploid) 421.174
CNS0095598Silvery flower (diploied) 198.184
CNS0095599Silvery flower (diploied) 290.683
CNS0095600Silvery flower (diploied) 321.288
CNS0095601Golden flower (diploid) 171.031
CNS0095602Golden flower (diploid) 239.895
CNS0095603Golden flower (diploid) 336.028
CNS0095604Slightly white alabastrum(tetraploid) 139.063
CNS0095605Slightly white alabastrum(tetraploid) 224.080
CNS0095606Slightly white alabastrum(tetraploid) 3107.249
CNS0095607Whole white alabastrum(tetraploid) 128.149
CNS0095608Whole white alabastrum(tetraploid) 212.655
CNS0095609Whole white alabastrum(tetraploid) 39.376
CNS0095610Silvery flower (tetraploid) 16.113
CNS0095611Silvery flower (tetraploid) 223.689
CNS0095612Silvery flower (tetraploid) 37.298
CNS0095613Golden flower (tetraploid) 11.498
CNS0095614Golden flower (tetraploid) 25.550
CNS0095615Golden flower (tetraploid) 30.786
CRA001975CRR073297Stem 138.480
CRR073298Stem 232.803
CRR073299Stem 335.449
CRR073300Leaf 134.423
CRR073301Leaf 244.054
CRR073302Leaf 330.860
CRR073303Juvenile bud 133.354
CRR073304Juvenile bud 25.088
CRR073305Juvenile bud 369.862
CRR073306Third green 11.125
CRR073307Third green 24.833
CRR073308Third green 33.908
CRR073309Second white 10.540
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.354
CRR073314Silver flowering 30.571
CRR073315Gold flowering 111.622
CRR073316Gold flowering 29.555
CRR073317Gold flowering 313.281
CRR073318Tawny withering 121.603
CRR073319Tawny withering 225.929
CRR073320Tawny withering 341.328