Detail information of GWHGAAZE017464


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011072262.17.2081E-171PREDICTED: caffeoylshikimate esterase [Sesamum indicum]
Swissprottr|Q9C942|CSE_ARATH4E-160Caffeoylshikimate esterase
trEMBLtr|F6HX77|F6HX77_VITVI6E-167Putative uncharacterized protein {ECO:0000313|EMBL:CCB59547.1}
TAIR10AT1G52760.18E-128lysophospholipase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene66451696646369-
GWHAAZE00000005mRNA66451696646369-
GWHAAZE00000005exon66451696645618-
GWHAAZE00000005exon66458916646141-
GWHAAZE00000005exon66462256646369-
GWHAAZE00000005CDS66462256646369-
GWHAAZE00000005CDS66458916646141-
GWHAAZE00000005CDS66451696645618-
Transcript Sequence

Network for GWHGAAZE017464

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_4422523.60E-40
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18368CSE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf125.193
SRR3591706second leaf41.638
SRR3591707mature leaf8.559
SRR3591708Shoot apex19.263
SRR3591709Stem1370.608
SRR3591710White floral bud28.228
SRR3591711White flower30.950
SRR3591712Green floral bud50.125
SRR3591713Yellow flower39.458
SRP173429 SRR8316895Juvenile bud stage 236.710
SRR8316896Juvenile bud stage 315.450
SRR8316897Juvenile bud stage 78.516
SRR8316894Third green stage 94.680
SRR8316900Third green stage 75.909
SRR8316901Third green stage 139.670
SRR8316898Complete white stage 13.257
SRR8316899Complete white stage 49.293
SRR8316903Complete white stage 19.469
SRR8316902Silver flowering stage8.075
SRR8316904Silver flowering stage8.708
SRR8316905Silver flowering stage3.766
SRR8316906Gold flowering stage 25.823
SRR8316907Gold flowering stage 27.237
SRR8316908Gold flowering stage 84.708
SRP132670SRR6706286Control114.040
SRR6706287Light intensity 50%93.965
SRR6706288Light intensity 20%73.318
CNP0000432CNS0095592Slightly white alabastrum(diploid) 161.252
CNS0095593Slightly white alabastrum(diploid) 233.527
CNS0095594Slightly white alabastrum(diploid) 3168.987
CNS0095595Whole white alabastrum(diploid) 219.153
CNS0095596Whole white alabastrum(diploid) 326.450
CNS0095597Whole white alabastrum(diploid) 416.683
CNS0095598Silvery flower (diploied) 16.755
CNS0095599Silvery flower (diploied) 27.404
CNS0095600Silvery flower (diploied) 313.403
CNS0095601Golden flower (diploid) 16.414
CNS0095602Golden flower (diploid) 220.004
CNS0095603Golden flower (diploid) 318.777
CNS0095604Slightly white alabastrum(tetraploid) 129.127
CNS0095605Slightly white alabastrum(tetraploid) 231.331
CNS0095606Slightly white alabastrum(tetraploid) 389.305
CNS0095607Whole white alabastrum(tetraploid) 19.875
CNS0095608Whole white alabastrum(tetraploid) 26.587
CNS0095609Whole white alabastrum(tetraploid) 393.842
CNS0095610Silvery flower (tetraploid) 129.316
CNS0095611Silvery flower (tetraploid) 214.405
CNS0095612Silvery flower (tetraploid) 310.524
CNS0095613Golden flower (tetraploid) 139.966
CNS0095614Golden flower (tetraploid) 263.094
CNS0095615Golden flower (tetraploid) 318.681
CRA001975CRR073297Stem 1273.841
CRR073298Stem 2254.743
CRR073299Stem 3178.999
CRR073300Leaf 137.124
CRR073301Leaf 227.813
CRR073302Leaf 352.079
CRR073303Juvenile bud 116.117
CRR073304Juvenile bud 29.577
CRR073305Juvenile bud 316.978
CRR073306Third green 16.930
CRR073307Third green 28.195
CRR073308Third green 37.613
CRR073309Second white 12.111
CRR073310Second white 24.367
CRR073311Second white 33.226
CRR073312Silver flowering 117.121
CRR073313Silver flowering 215.267
CRR073314Silver flowering 323.743
CRR073315Gold flowering 12.311
CRR073316Gold flowering 23.094
CRR073317Gold flowering 33.308
CRR073318Tawny withering 170.832
CRR073319Tawny withering 258.726
CRR073320Tawny withering 3107.088