Detail information of GWHGAAZE017468


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007202311.10hypothetical protein PRUPE_ppa008052mg [Prunus persica]
Swissprottr|Q38884|EIF3I_ARATH4E-28Eukaryotic translation initiation factor 3 subunit I {ECO:0000255|HAMAP-Rule:MF_03008}
trEMBLtr|M5W9P5|M5W9P5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ03510.1}
TAIR10AT3G15610.17E-144Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene67200066724551-
GWHAAZE00000005mRNA67200066724551-
GWHAAZE00000005exon67200066720280-
GWHAAZE00000005exon67204056720544-
GWHAAZE00000005exon67206656720802-
GWHAAZE00000005exon67219006722075-
GWHAAZE00000005exon67227276722808-
GWHAAZE00000005exon67232536723388-
GWHAAZE00000005exon67242966724324-
GWHAAZE00000005exon67244336724551-
GWHAAZE00000005CDS67244336724551-
GWHAAZE00000005CDS67242966724324-
GWHAAZE00000005CDS67232536723388-
GWHAAZE00000005CDS67227276722808-
GWHAAZE00000005CDS67219006722075-
GWHAAZE00000005CDS67206656720802-
GWHAAZE00000005CDS67204056720544-
GWHAAZE00000005CDS67200066720280-
Transcript Sequence

Network for GWHGAAZE017468

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4064990.0029
PF00400.33WD401051400.01
PF00400.33WD401912240.054
PF00400.33WD402753070.00015
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
K13137STRAP, UNRIP RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.645
SRR3591706second leaf2.339
SRR3591707mature leaf2.127
SRR3591708Shoot apex11.004
SRR3591709Stem10.747
SRR3591710White floral bud12.601
SRR3591711White flower10.073
SRR3591712Green floral bud12.019
SRR3591713Yellow flower12.800
SRP173429 SRR8316895Juvenile bud stage 8.483
SRR8316896Juvenile bud stage 13.520
SRR8316897Juvenile bud stage 6.237
SRR8316894Third green stage 5.557
SRR8316900Third green stage 16.544
SRR8316901Third green stage 16.448
SRR8316898Complete white stage 6.064
SRR8316899Complete white stage 20.158
SRR8316903Complete white stage 8.540
SRR8316902Silver flowering stage3.837
SRR8316904Silver flowering stage5.817
SRR8316905Silver flowering stage2.472
SRR8316906Gold flowering stage 7.639
SRR8316907Gold flowering stage 7.371
SRR8316908Gold flowering stage 7.955
SRP132670SRR6706286Control23.459
SRR6706287Light intensity 50%21.456
SRR6706288Light intensity 20%22.239
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.289
CNS0095593Slightly white alabastrum(diploid) 214.692
CNS0095594Slightly white alabastrum(diploid) 313.815
CNS0095595Whole white alabastrum(diploid) 214.332
CNS0095596Whole white alabastrum(diploid) 316.548
CNS0095597Whole white alabastrum(diploid) 411.266
CNS0095598Silvery flower (diploied) 112.649
CNS0095599Silvery flower (diploied) 210.953
CNS0095600Silvery flower (diploied) 37.350
CNS0095601Golden flower (diploid) 110.950
CNS0095602Golden flower (diploid) 210.139
CNS0095603Golden flower (diploid) 39.662
CNS0095604Slightly white alabastrum(tetraploid) 110.141
CNS0095605Slightly white alabastrum(tetraploid) 212.205
CNS0095606Slightly white alabastrum(tetraploid) 312.944
CNS0095607Whole white alabastrum(tetraploid) 19.715
CNS0095608Whole white alabastrum(tetraploid) 211.362
CNS0095609Whole white alabastrum(tetraploid) 310.207
CNS0095610Silvery flower (tetraploid) 110.111
CNS0095611Silvery flower (tetraploid) 210.294
CNS0095612Silvery flower (tetraploid) 38.530
CNS0095613Golden flower (tetraploid) 19.565
CNS0095614Golden flower (tetraploid) 28.402
CNS0095615Golden flower (tetraploid) 37.269
CRA001975CRR073297Stem 114.425
CRR073298Stem 214.247
CRR073299Stem 312.008
CRR073300Leaf 119.048
CRR073301Leaf 222.739
CRR073302Leaf 313.590
CRR073303Juvenile bud 120.743
CRR073304Juvenile bud 212.841
CRR073305Juvenile bud 318.647
CRR073306Third green 13.444
CRR073307Third green 24.886
CRR073308Third green 34.317
CRR073309Second white 12.028
CRR073310Second white 22.213
CRR073311Second white 31.886
CRR073312Silver flowering 12.058
CRR073313Silver flowering 21.060
CRR073314Silver flowering 31.097
CRR073315Gold flowering 14.079
CRR073316Gold flowering 26.600
CRR073317Gold flowering 32.707
CRR073318Tawny withering 113.484
CRR073319Tawny withering 29.562
CRR073320Tawny withering 310.353