Gene detail

Detail information of GWHGAAZE017471

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011072254.1	0	PREDICTED: cytochrome P450 734A1 [Sesamum indicum]
Swissprot	tr\|O48786\|C734A_ARATH	0	Cytochrome P450 734A1
trEMBL	tr\|A0A068TQ17\|A0A068TQ17_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313\|EMBL:CDO98112.1}
TAIR10	AT2G26710.1	2E-164	Cytochrome P450 superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	6784319	6787383	+
GWHAAZE00000005	mRNA	6784319	6787383	+
GWHAAZE00000005	exon	6784319	6784589	+
GWHAAZE00000005	exon	6784825	6785048	+
GWHAAZE00000005	exon	6785281	6785528	+
GWHAAZE00000005	exon	6786262	6786655	+
GWHAAZE00000005	exon	6786945	6787206	+
GWHAAZE00000005	exon	6787301	6787383	+
GWHAAZE00000005	CDS	6784319	6784589	+
GWHAAZE00000005	CDS	6784825	6785048	+
GWHAAZE00000005	CDS	6785281	6785528	+
GWHAAZE00000005	CDS	6786262	6786655	+
GWHAAZE00000005	CDS	6786945	6787206	+
GWHAAZE00000005	CDS	6787301	6787383	+

Transcript Sequence
>GWHTAAZE017491 ATGGAGAAGTGGTTTTGGATGCTTGTATTTTCATATGGGGTTGTGTTGCTTCTGATGAAGGTAGTGATTTATTTGTGGTGGAGACCAAGGAGAATTGAGAGGCACTTTTCTAAGCAAGGGATAAGAGGACCTCCTTATCAACTCTTCATTGGCAACCTAAAGGAGCTTGTCTCTTTAACTTTGAAGGCTTCCTCTCAACCCATGCCTTATTTCTCTCATGATATTCTTCCCAGGGTTCTCACCTTTTATCATCACTGGAAGAAAATTTATGGTGCAACATTTGTTATATGGTTTGGACCAACGCCTCGTTTGACAATCACTGAACCAGCCCTTATTAGAGAGATATTCATCCTGAAATCAGATTTGTTTGAGAAAAATGAGTCACCCCCACTTGTTAGAAAGTTAGAAGGTGATGGTTTGTTAACTCTCAAAGGGGAAAAATGGGCTCACCACAGAAAGATCATCACACCTACCTTCTACTTGGAGAATCTCAGATTGATGATACCGGTGATGGGTAAGAGCATGGAAAGGGTATTAGAAAAGTGGTCGGCGATGAGAAATGCTGCGGGGGAAGTGGAAATAGAAGTGTCGGAATGGTTCCAAAAGTTGGTAGAAGATGCGATAACGCGTACGGTGTTTGGGAACAGCAGCTACCAAGATGGAAAGAAAATACTCGAACTACAAGCCCAACAAATGCGCTACGCTACCGAGTCTTTTCAAAAGGTTTTCATCCCCGGAAATAGGTTCTTGCCGACTAAAAAGAATAGAATTTCTTGGAGATTGGATAAAGAGATTAGAAAATCTTTGACGAGTCTCATTGATCAAAGTACCAAAAATTCCGCCAATCGCACGGTGTCAGAAGAATGTCCACAGGATTTGTTGCAACACATGATCAAAGCAAGCTTTAAACATAAATCTCTCCCTAGCTCGTCGTCTGTTATCACGATTCAAGACATTGTTGAGGAATGCAAGAGTATATTCTTTGCCGGCAAACATACGACCTCGAACCTGATGACGTGGACGACCATTTTGCTGGCTATGCACCCTGAATGGCAGGAAGCGGCACGCGACGAGGTCTTGAGGGTATGTGGGGCACGTGATGTCCCAACTAAAGATGATGTTGCCAAGCTTAGATTGGTGGGTATGATCTTGAATGAATCACTGAGGTTATACCCTCCCGCTGTGGCAACAATCAGAAGAGCCAGAGTTGACATGCAACTAGGAGACCTTATGATTCCCCACGGGACAGAGCTCCTAATACCAATCCTAGCTGTTCATCACGATCCAAGATGGTGGGGCCCTGATGCAACCAAATTTAACCCTGCTCGATTCGATCAGGAGTGGCCCACGCTGCAAATCATCCGATGGCCTTCATGCCGTTCGGGCTCGGGTCCCGTAGCACACTCCAACGGTTCTGATGCTCCTCTATCCGCAACATGGGGCACCTATCATCTTTCGCCAATTGTAGGTCCGGTCCCCTAA

Network for GWHGAAZE017471

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	82	447	1.20E-67

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15639	CYP734A1, BAS1	Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.636
	SRR3591706	second leaf	1.313
	SRR3591707	mature leaf	0.111
	SRR3591708	Shoot apex	0.163
	SRR3591709	Stem	0.422
	SRR3591710	White floral bud	0.269
	SRR3591711	White flower	0.249
	SRR3591712	Green floral bud	0.110
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.027
	SRR8316896	Juvenile bud stage	0.045
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.173
	SRR8316901	Third green stage	0.103
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.242
	SRR8316904	Silver flowering stage	0.112
	SRR8316905	Silver flowering stage	0.073
	SRR8316906	Gold flowering stage	0.221
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.090
SRP132670	SRR6706286	Control	0.115
	SRR6706287	Light intensity 50%	0.025
	SRR6706288	Light intensity 20%	0.132
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.029
	CNS0095593	Slightly white alabastrum(diploid) 2	0.066
	CNS0095594	Slightly white alabastrum(diploid) 3	0.075
	CNS0095595	Whole white alabastrum(diploid) 2	0.198
	CNS0095596	Whole white alabastrum(diploid) 3	0.321
	CNS0095597	Whole white alabastrum(diploid) 4	0.170
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.001
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.348
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.034
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.216
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.328
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.699
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.052
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.011
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.032
	CRR073298	Stem 2	0.044
	CRR073299	Stem 3	0.068
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.089
	CRR073302	Leaf 3	0.081
	CRR073303	Juvenile bud 1	0.082
	CRR073304	Juvenile bud 2	0.080
	CRR073305	Juvenile bud 3	0.128
	CRR073306	Third green 1	0.398
	CRR073307	Third green 2	0.394
	CRR073308	Third green 3	0.336
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.094
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.101
	CRR073315	Gold flowering 1	0.454
	CRR073316	Gold flowering 2	0.547
	CRR073317	Gold flowering 3	0.342
	CRR073318	Tawny withering 1	0.434
	CRR073319	Tawny withering 2	1.309
	CRR073320	Tawny withering 3	0.849