Detail information of GWHGAAZE017481


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006427204.18.04195E-78hypothetical protein CICLE_v10026275mg [Citrus clementina]
Swissprottr|Q9LLC1|BCCP2_ARATH1E-10Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic (Precursor)
trEMBLtr|V4UM06|V4UM06_9ROSI3E-78Uncharacterized protein {ECO:0000313|EMBL:ESR40444.1}
TAIR10AT3G15690.23E-57Single hybrid motif superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene68789576880974+
GWHAAZE00000005mRNA68789576880974+
GWHAAZE00000005exon68789576879070+
GWHAAZE00000005exon68792146879450+
GWHAAZE00000005exon68795356879597+
GWHAAZE00000005exon68805536880621+
GWHAAZE00000005exon68807326880777+
GWHAAZE00000005exon68809016880974+
GWHAAZE00000005CDS68789576879070+
GWHAAZE00000005CDS68792146879450+
GWHAAZE00000005CDS68795356879597+
GWHAAZE00000005CDS68805536880621+
GWHAAZE00000005CDS68807326880777+
GWHAAZE00000005CDS68809016880974+
Transcript Sequence

Network for GWHGAAZE017481

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0291


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00364.23Biotin_lipoyl1141882.80E-07
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.372
SRR3591706second leaf18.036
SRR3591707mature leaf14.436
SRR3591708Shoot apex20.129
SRR3591709Stem11.605
SRR3591710White floral bud10.988
SRR3591711White flower21.720
SRR3591712Green floral bud15.297
SRR3591713Yellow flower27.934
SRP173429 SRR8316895Juvenile bud stage 18.427
SRR8316896Juvenile bud stage 22.823
SRR8316897Juvenile bud stage 10.570
SRR8316894Third green stage 8.818
SRR8316900Third green stage 26.656
SRR8316901Third green stage 22.919
SRR8316898Complete white stage 11.136
SRR8316899Complete white stage 29.652
SRR8316903Complete white stage 14.854
SRR8316902Silver flowering stage16.395
SRR8316904Silver flowering stage17.941
SRR8316905Silver flowering stage9.472
SRR8316906Gold flowering stage 32.316
SRR8316907Gold flowering stage 44.209
SRR8316908Gold flowering stage 40.887
SRP132670SRR6706286Control6.119
SRR6706287Light intensity 50%7.111
SRR6706288Light intensity 20%8.230
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.617
CNS0095593Slightly white alabastrum(diploid) 219.382
CNS0095594Slightly white alabastrum(diploid) 318.466
CNS0095595Whole white alabastrum(diploid) 221.616
CNS0095596Whole white alabastrum(diploid) 321.657
CNS0095597Whole white alabastrum(diploid) 416.153
CNS0095598Silvery flower (diploied) 126.384
CNS0095599Silvery flower (diploied) 229.726
CNS0095600Silvery flower (diploied) 331.259
CNS0095601Golden flower (diploid) 131.585
CNS0095602Golden flower (diploid) 230.196
CNS0095603Golden flower (diploid) 328.263
CNS0095604Slightly white alabastrum(tetraploid) 114.681
CNS0095605Slightly white alabastrum(tetraploid) 215.664
CNS0095606Slightly white alabastrum(tetraploid) 318.371
CNS0095607Whole white alabastrum(tetraploid) 111.689
CNS0095608Whole white alabastrum(tetraploid) 211.753
CNS0095609Whole white alabastrum(tetraploid) 318.178
CNS0095610Silvery flower (tetraploid) 149.792
CNS0095611Silvery flower (tetraploid) 252.896
CNS0095612Silvery flower (tetraploid) 336.435
CNS0095613Golden flower (tetraploid) 141.984
CNS0095614Golden flower (tetraploid) 251.658
CNS0095615Golden flower (tetraploid) 334.169
CRA001975CRR073297Stem 18.015
CRR073298Stem 26.057
CRR073299Stem 35.367
CRR073300Leaf 17.683
CRR073301Leaf 25.627
CRR073302Leaf 38.694
CRR073303Juvenile bud 17.683
CRR073304Juvenile bud 28.534
CRR073305Juvenile bud 35.446
CRR073306Third green 11.492
CRR073307Third green 21.717
CRR073308Third green 30.811
CRR073309Second white 14.503
CRR073310Second white 26.075
CRR073311Second white 33.539
CRR073312Silver flowering 14.478
CRR073313Silver flowering 21.616
CRR073314Silver flowering 31.605
CRR073315Gold flowering 18.277
CRR073316Gold flowering 210.511
CRR073317Gold flowering 34.055
CRR073318Tawny withering 15.663
CRR073319Tawny withering 25.369
CRR073320Tawny withering 38.146