Detail information of GWHGAAZE017535


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006427463.10hypothetical protein CICLE_v10024745mg [Citrus clementina]
Swissprottr|Q94AI7|TPL_ARATH0Protein TOPLESS
trEMBLtr|V4S065|V4S065_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR40703.1}
TAIR10AT1G15750.40Transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene76275197643979-
GWHAAZE00000005mRNA76275197643979-
GWHAAZE00000005exon76439007643979-
GWHAAZE00000005exon76435017643680-
GWHAAZE00000005exon76432827643395-
GWHAAZE00000005exon76430427643200-
GWHAAZE00000005exon76424187642595-
GWHAAZE00000005exon76422017642327-
GWHAAZE00000005exon76419777642086-
GWHAAZE00000005exon76319647632129-
GWHAAZE00000005exon76317397631848-
GWHAAZE00000005exon76315637631632-
GWHAAZE00000005exon76313937631466-
GWHAAZE00000005exon76311917631286-
GWHAAZE00000005exon76309887631083-
GWHAAZE00000005exon76307447630871-
GWHAAZE00000005exon76303557630589-
GWHAAZE00000005exon76301047630262-
GWHAAZE00000005exon76296497629795-
GWHAAZE00000005exon76290967629302-
GWHAAZE00000005exon76288687628996-
GWHAAZE00000005exon76286927628787-
GWHAAZE00000005exon76281837628371-
GWHAAZE00000005exon76279267628035-
GWHAAZE00000005exon76275197627735-
GWHAAZE00000005CDS76439007643979-
GWHAAZE00000005CDS76435017643680-
GWHAAZE00000005CDS76432827643395-
GWHAAZE00000005CDS76430427643200-
GWHAAZE00000005CDS76424187642595-
GWHAAZE00000005CDS76422017642327-
GWHAAZE00000005CDS76419777642086-
GWHAAZE00000005CDS76319647632129-
GWHAAZE00000005CDS76317397631848-
GWHAAZE00000005CDS76315637631632-
GWHAAZE00000005CDS76313937631466-
GWHAAZE00000005CDS76311917631286-
GWHAAZE00000005CDS76309887631083-
GWHAAZE00000005CDS76307447630871-
GWHAAZE00000005CDS76303557630589-
GWHAAZE00000005CDS76301047630262-
GWHAAZE00000005CDS76296497629795-
GWHAAZE00000005CDS76290967629302-
GWHAAZE00000005CDS76288687628996-
GWHAAZE00000005CDS76286927628787-
GWHAAZE00000005CDS76281837628371-
GWHAAZE00000005CDS76279267628035-
GWHAAZE00000005CDS76275197627735-
Transcript Sequence

Network for GWHGAAZE017535

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD404574915.20E-05
PF00400.33WD408598920.016
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.637
SRR3591706second leaf34.259
SRR3591707mature leaf32.758
SRR3591708Shoot apex49.380
SRR3591709Stem70.634
SRR3591710White floral bud59.873
SRR3591711White flower62.066
SRR3591712Green floral bud49.513
SRR3591713Yellow flower52.332
SRP173429 SRR8316895Juvenile bud stage 25.279
SRR8316896Juvenile bud stage 30.662
SRR8316897Juvenile bud stage 17.609
SRR8316894Third green stage 15.251
SRR8316900Third green stage 37.537
SRR8316901Third green stage 30.642
SRR8316898Complete white stage 19.705
SRR8316899Complete white stage 51.664
SRR8316903Complete white stage 40.253
SRR8316902Silver flowering stage13.619
SRR8316904Silver flowering stage21.908
SRR8316905Silver flowering stage9.571
SRR8316906Gold flowering stage 28.211
SRR8316907Gold flowering stage 25.936
SRR8316908Gold flowering stage 26.461
SRP132670SRR6706286Control49.386
SRR6706287Light intensity 50%47.738
SRR6706288Light intensity 20%47.463
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.957
CNS0095593Slightly white alabastrum(diploid) 222.605
CNS0095594Slightly white alabastrum(diploid) 318.561
CNS0095595Whole white alabastrum(diploid) 222.058
CNS0095596Whole white alabastrum(diploid) 315.120
CNS0095597Whole white alabastrum(diploid) 419.387
CNS0095598Silvery flower (diploied) 139.325
CNS0095599Silvery flower (diploied) 231.741
CNS0095600Silvery flower (diploied) 357.021
CNS0095601Golden flower (diploid) 131.548
CNS0095602Golden flower (diploid) 254.804
CNS0095603Golden flower (diploid) 353.477
CNS0095604Slightly white alabastrum(tetraploid) 128.843
CNS0095605Slightly white alabastrum(tetraploid) 221.984
CNS0095606Slightly white alabastrum(tetraploid) 368.964
CNS0095607Whole white alabastrum(tetraploid) 118.194
CNS0095608Whole white alabastrum(tetraploid) 212.502
CNS0095609Whole white alabastrum(tetraploid) 339.190
CNS0095610Silvery flower (tetraploid) 164.242
CNS0095611Silvery flower (tetraploid) 263.011
CNS0095612Silvery flower (tetraploid) 348.648
CNS0095613Golden flower (tetraploid) 132.397
CNS0095614Golden flower (tetraploid) 257.036
CNS0095615Golden flower (tetraploid) 336.856
CRA001975CRR073297Stem 140.313
CRR073298Stem 239.038
CRR073299Stem 335.237
CRR073300Leaf 146.689
CRR073301Leaf 240.925
CRR073302Leaf 331.681
CRR073303Juvenile bud 132.104
CRR073304Juvenile bud 228.466
CRR073305Juvenile bud 352.086
CRR073306Third green 112.619
CRR073307Third green 211.299
CRR073308Third green 316.348
CRR073309Second white 111.771
CRR073310Second white 214.270
CRR073311Second white 316.552
CRR073312Silver flowering 111.643
CRR073313Silver flowering 213.171
CRR073314Silver flowering 312.520
CRR073315Gold flowering 112.533
CRR073316Gold flowering 219.959
CRR073317Gold flowering 315.196
CRR073318Tawny withering 132.798
CRR073319Tawny withering 226.576
CRR073320Tawny withering 330.160