Gene detail

Detail information of GWHGAAZE017559

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AGD98713.1	8.5184E-164	aquaporin protein 10 [Camellia sinensis]
Swissprot	tr\|Q9SAI4\|NIP61_ARATH	2E-136	Aquaporin NIP6-1
trEMBL	tr\|L7YDH8\|L7YDH8_CAMSI	3E-164	Aquaporin protein 10 {ECO:0000313\|EMBL:AGD98713.1}
TAIR10	AT1G80760.1	2E-85	NOD26-like intrinsic protein 6;1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	7941828	7944166	-
GWHAAZE00000005	mRNA	7941828	7944166	-
GWHAAZE00000005	exon	7941828	7942032	-
GWHAAZE00000005	exon	7942509	7942570	-
GWHAAZE00000005	exon	7942976	7943170	-
GWHAAZE00000005	exon	7943639	7943766	-
GWHAAZE00000005	exon	7943875	7944166	-
GWHAAZE00000005	CDS	7943875	7944166	-
GWHAAZE00000005	CDS	7943639	7943766	-
GWHAAZE00000005	CDS	7942976	7943170	-
GWHAAZE00000005	CDS	7942509	7942570	-
GWHAAZE00000005	CDS	7941828	7942032	-

Transcript Sequence
>GWHTAAZE017579 ATGGAATCTGAAGATGTAGCATCAGCACCTTCAACACCAGCAACACCGGGTACTCCTGGTGCTCCTCTCTTTGGTGGGTTCAAGCCAGACAGAAACAGCAGTTTCAAAAGATCCCTTCTTAAGAGCTGCAAGTGCTTCAGTGTTGAAGCTTGGCCCTTGGAAGAGGGCGCCCTCCCCTCTGTCTCTTGCTCATTGCCCTCTCCTCCCATCTCTCTTGCCCGAAAGGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTACATTCTCTCTCTATACATACTGACATATTTACATGCCTAGCGGCCTCCACTGGGCTGGCCGTGATGATAGTGATACTGTCCACCGGGCACATATCCGGAGCCCATCTCAACCCAGCAGTCACTATTGCATTTGCTGCTCTCAAGCACTTCCCATGGAAGCATGTACCTATGTACATAGGAGCACAAGCGATGGCATCATTGTTAGCTGCATTTGCACTAAAAGTGATATTTCACCCAATAATGGGTGGGGGAGTGACTGTTCCTTCAGGGGACTATGGTCAAGCCTTTGCTTTGGAATTCATTATTAGCTTCAACCTCATGTTTGTTATCACTGCAGTGGCCACCGATACTAGAGCCGTTGGAGAGCTAGCTGGAATTGCAGTTGGAGCTACTGTAATGCTCAACATACTCATAGCCGGGGAAACTACGGGAGCTTCAATGAATCCAGTGAGAACTTTGGGACCAGCAATAGCAGCAAACAATTTCAAAGGCATATGGATCTACCTTACGGCTCCGATACTTGGCGCTCTGTTTGGCGCGGGTATCTACACTGTAGTTAAATTGCCCGAGGATGATAGCAACATTGAAGAAAAGCCCACAACAGTGCATAGCTTCAGAAGGTGA

Network for GWHGAAZE017559

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0297

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00230.21	MIP	95	269	1.60E-42

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0016020	cellular_component	membrane
GO:0015267	molecular_function	channel activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	115.016
	SRR3591706	second leaf	47.513
	SRR3591707	mature leaf	4.484
	SRR3591708	Shoot apex	57.352
	SRR3591709	Stem	39.309
	SRR3591710	White floral bud	5.746
	SRR3591711	White flower	10.936
	SRR3591712	Green floral bud	17.174
	SRR3591713	Yellow flower	2.332
SRP173429	SRR8316895	Juvenile bud stage	20.805
	SRR8316896	Juvenile bud stage	19.107
	SRR8316897	Juvenile bud stage	11.193
	SRR8316894	Third green stage	8.374
	SRR8316900	Third green stage	19.622
	SRR8316901	Third green stage	15.687
	SRR8316898	Complete white stage	5.156
	SRR8316899	Complete white stage	11.824
	SRR8316903	Complete white stage	5.031
	SRR8316902	Silver flowering stage	3.334
	SRR8316904	Silver flowering stage	6.063
	SRR8316905	Silver flowering stage	1.781
	SRR8316906	Gold flowering stage	3.849
	SRR8316907	Gold flowering stage	5.261
	SRR8316908	Gold flowering stage	9.141
SRP132670	SRR6706286	Control	21.930
	SRR6706287	Light intensity 50%	18.045
	SRR6706288	Light intensity 20%	18.560
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	20.747
	CNS0095593	Slightly white alabastrum(diploid) 2	18.526
	CNS0095594	Slightly white alabastrum(diploid) 3	14.592
	CNS0095595	Whole white alabastrum(diploid) 2	9.064
	CNS0095596	Whole white alabastrum(diploid) 3	8.169
	CNS0095597	Whole white alabastrum(diploid) 4	6.132
	CNS0095598	Silvery flower (diploied) 1	9.765
	CNS0095599	Silvery flower (diploied) 2	11.341
	CNS0095600	Silvery flower (diploied) 3	2.108
	CNS0095601	Golden flower (diploid) 1	5.397
	CNS0095602	Golden flower (diploid) 2	1.548
	CNS0095603	Golden flower (diploid) 3	2.316
	CNS0095604	Slightly white alabastrum(tetraploid) 1	19.401
	CNS0095605	Slightly white alabastrum(tetraploid) 2	20.379
	CNS0095606	Slightly white alabastrum(tetraploid) 3	39.651
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.219
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.975
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.403
	CNS0095610	Silvery flower (tetraploid) 1	6.339
	CNS0095611	Silvery flower (tetraploid) 2	4.360
	CNS0095612	Silvery flower (tetraploid) 3	5.683
	CNS0095613	Golden flower (tetraploid) 1	1.062
	CNS0095614	Golden flower (tetraploid) 2	6.685
	CNS0095615	Golden flower (tetraploid) 3	0.925
CRA001975	CRR073297	Stem 1	46.628
	CRR073298	Stem 2	45.198
	CRR073299	Stem 3	51.940
	CRR073300	Leaf 1	20.204
	CRR073301	Leaf 2	28.156
	CRR073302	Leaf 3	25.813
	CRR073303	Juvenile bud 1	12.701
	CRR073304	Juvenile bud 2	2.481
	CRR073305	Juvenile bud 3	11.251
	CRR073306	Third green 1	3.491
	CRR073307	Third green 2	2.101
	CRR073308	Third green 3	7.449
	CRR073309	Second white 1	4.384
	CRR073310	Second white 2	2.022
	CRR073311	Second white 3	0.991
	CRR073312	Silver flowering 1	0.791
	CRR073313	Silver flowering 2	1.501
	CRR073314	Silver flowering 3	1.162
	CRR073315	Gold flowering 1	4.503
	CRR073316	Gold flowering 2	2.694
	CRR073317	Gold flowering 3	7.317
	CRR073318	Tawny withering 1	13.218
	CRR073319	Tawny withering 2	5.494
	CRR073320	Tawny withering 3	20.408