Detail information of GWHGAAZE017580


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP04579.16.9046E-122unnamed protein product [Coffea canephora]
Swissprottr|O22040|ANP1_ARATH3E-27Mitogen-activated protein kinase kinase kinase ANP1
trEMBLtr|A0A068U8R3|A0A068U8R3_COFCA3E-122Coffea canephora DH200=94 genomic scaffold, scaffold_13 {ECO:0000313|EMBL:CDP04579.1}
TAIR10AT4G36950.13E-48mitogen-activated protein kinase kinase kinase 21

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene81696668174221-
GWHAAZE00000005mRNA81696668174221-
GWHAAZE00000005exon81741098174221-
GWHAAZE00000005exon81696668170461-
GWHAAZE00000005CDS81741098174221-
GWHAAZE00000005CDS81696668170461-
Transcript Sequence

Network for GWHGAAZE017580

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase792922.80E-41
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.614
SRR3591706second leaf2.410
SRR3591707mature leaf2.189
SRR3591708Shoot apex4.266
SRR3591709Stem13.628
SRR3591710White floral bud13.455
SRR3591711White flower19.059
SRR3591712Green floral bud6.103
SRR3591713Yellow flower24.229
SRP173429 SRR8316895Juvenile bud stage 4.104
SRR8316896Juvenile bud stage 3.439
SRR8316897Juvenile bud stage 3.554
SRR8316894Third green stage 3.487
SRR8316900Third green stage 4.449
SRR8316901Third green stage 4.581
SRR8316898Complete white stage 1.793
SRR8316899Complete white stage 12.536
SRR8316903Complete white stage 3.443
SRR8316902Silver flowering stage4.206
SRR8316904Silver flowering stage5.637
SRR8316905Silver flowering stage3.402
SRR8316906Gold flowering stage 19.739
SRR8316907Gold flowering stage 11.635
SRR8316908Gold flowering stage 17.003
SRP132670SRR6706286Control3.263
SRR6706287Light intensity 50%4.923
SRR6706288Light intensity 20%2.158
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.350
CNS0095593Slightly white alabastrum(diploid) 25.124
CNS0095594Slightly white alabastrum(diploid) 34.391
CNS0095595Whole white alabastrum(diploid) 24.416
CNS0095596Whole white alabastrum(diploid) 31.155
CNS0095597Whole white alabastrum(diploid) 44.766
CNS0095598Silvery flower (diploied) 114.753
CNS0095599Silvery flower (diploied) 211.399
CNS0095600Silvery flower (diploied) 39.874
CNS0095601Golden flower (diploid) 116.075
CNS0095602Golden flower (diploid) 214.391
CNS0095603Golden flower (diploid) 312.352
CNS0095604Slightly white alabastrum(tetraploid) 10.989
CNS0095605Slightly white alabastrum(tetraploid) 20.249
CNS0095606Slightly white alabastrum(tetraploid) 31.747
CNS0095607Whole white alabastrum(tetraploid) 10.760
CNS0095608Whole white alabastrum(tetraploid) 20.197
CNS0095609Whole white alabastrum(tetraploid) 30.684
CNS0095610Silvery flower (tetraploid) 15.739
CNS0095611Silvery flower (tetraploid) 23.731
CNS0095612Silvery flower (tetraploid) 37.328
CNS0095613Golden flower (tetraploid) 18.294
CNS0095614Golden flower (tetraploid) 27.172
CNS0095615Golden flower (tetraploid) 39.891
CRA001975CRR073297Stem 12.219
CRR073298Stem 21.378
CRR073299Stem 31.845
CRR073300Leaf 14.753
CRR073301Leaf 23.885
CRR073302Leaf 31.883
CRR073303Juvenile bud 13.262
CRR073304Juvenile bud 27.560
CRR073305Juvenile bud 35.801
CRR073306Third green 14.224
CRR073307Third green 26.578
CRR073308Third green 35.011
CRR073309Second white 12.170
CRR073310Second white 23.023
CRR073311Second white 31.865
CRR073312Silver flowering 18.708
CRR073313Silver flowering 24.510
CRR073314Silver flowering 34.205
CRR073315Gold flowering 11.588
CRR073316Gold flowering 26.904
CRR073317Gold flowering 35.883
CRR073318Tawny withering 12.638
CRR073319Tawny withering 26.542
CRR073320Tawny withering 33.624