Gene detail

Detail information of GWHGAAZE017619

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AFB75401.1	2.6737E-156	IPK2 protein [Vitis vinifera]
Swissprot	tr\|Q9FLT2\|IPMKB_ARATH	2E-128	Inositol polyphosphate multikinase beta
trEMBL	tr\|H6X2P5\|H6X2P5_VITVI	1E-156	IPK2 protein {ECO:0000313\|EMBL:AFB75401.1}
TAIR10	AT5G61760.1	2E-103	inositol polyphosphate kinase 2 beta

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	8655554	8656468	+
GWHAAZE00000005	mRNA	8655554	8656468	+
GWHAAZE00000005	exon	8655554	8656468	+
GWHAAZE00000005	CDS	8655554	8656468	+

Transcript Sequence
>GWHTAAZE017639 ATGCTTAAGGTTCCGTGCGATCAGGTTGCTGGACACCAAGCCCGGGGTGGAAAGCTCGGCCCCCTCATTGATGATTCCGGGCGCTTCTACAAGCCTCTCCAGAGTGATGAGCGTGGGTCCAGCGAAGTCGCCTTCTACACATCATTCTCTTCCAACCAGAAAATCCCAGACCACATTCGCAGATTCTTCCCCATCTTCCATGGCACTCAGCTTGTAGAAGCATCCAATGGGTCTGGCCTTCATCCACACCTAATTTTGCAAGATCTTGTCTCGACCCGCCTCAATCCATCTATAATGGACATCAAGATGGGCTCAAGAACATGGCCCACAAAAGCGTCTGAGGACTACATCGAAAAATGCTTGAAGAAAGATCGAGGGTCCACAAGCGTTTCATTGGGATTTAGGATATCTGGCATGCAAATCTATGATAATAAAACCTCGGGTTTTTTTAAGCCTGAAAAGAAGCTTATTCAAAGCTTTTCTGCTGATGATACTAGGTTATTTCTGAGGAAATTCGTTTCTTCTAATGCGTCTGATTTGAGTGCGGGCCCAGATTGCGCGTTTGCCTCTGTGGTTTATGGTGGTTCAAATGGGATTTTGGCACAATTGCTGGAGCTAAAAGCATGGTTTGAGGATCAAACTATTTTCCACTTTTATTCCTGTTCGGTACTTTTGATGTACGAAAATGAGTTGGCATTGAAAGGGCTGAATTCTAACCCTGAAGTTAAGCTTATTGATTTTGCGCATGTTGTTGAAGGTAAAGGCGTAATTGATCATAACTTCTTGGGGGCGCTTAGCTCTTTGATAAAGTTCATCTCGGAAATACTCACCACTCCCGATGATTACCTGATCGAAGATTGTTCGAATGAAATGGAAAAGGAAAGGGTTATTTGTGATAATGGTGCTGATGAATGA

Network for GWHGAAZE017619

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03770.17	IPK	84	272	2.40E-45

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00915	IPMK, IPK2	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070
		Autophagy - yeast	map04138

Gene Ontology

GO term	Ontology	Name
GO:0032958	biological_process	inositol phosphate biosynthetic process
GO:0016301	molecular_function	kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	64.298
	SRR3591706	second leaf	34.460
	SRR3591707	mature leaf	30.369
	SRR3591708	Shoot apex	42.845
	SRR3591709	Stem	62.214
	SRR3591710	White floral bud	38.850
	SRR3591711	White flower	32.495
	SRR3591712	Green floral bud	47.929
	SRR3591713	Yellow flower	25.059
SRP173429	SRR8316895	Juvenile bud stage	29.089
	SRR8316896	Juvenile bud stage	48.494
	SRR8316897	Juvenile bud stage	30.629
	SRR8316894	Third green stage	20.223
	SRR8316900	Third green stage	60.860
	SRR8316901	Third green stage	56.059
	SRR8316898	Complete white stage	22.108
	SRR8316899	Complete white stage	70.436
	SRR8316903	Complete white stage	27.760
	SRR8316902	Silver flowering stage	10.386
	SRR8316904	Silver flowering stage	12.930
	SRR8316905	Silver flowering stage	4.594
	SRR8316906	Gold flowering stage	15.202
	SRR8316907	Gold flowering stage	11.898
	SRR8316908	Gold flowering stage	17.326
SRP132670	SRR6706286	Control	50.023
	SRR6706287	Light intensity 50%	52.389
	SRR6706288	Light intensity 20%	60.203
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	53.575
	CNS0095593	Slightly white alabastrum(diploid) 2	58.531
	CNS0095594	Slightly white alabastrum(diploid) 3	53.875
	CNS0095595	Whole white alabastrum(diploid) 2	48.097
	CNS0095596	Whole white alabastrum(diploid) 3	41.695
	CNS0095597	Whole white alabastrum(diploid) 4	38.184
	CNS0095598	Silvery flower (diploied) 1	35.443
	CNS0095599	Silvery flower (diploied) 2	30.171
	CNS0095600	Silvery flower (diploied) 3	29.089
	CNS0095601	Golden flower (diploid) 1	29.720
	CNS0095602	Golden flower (diploid) 2	31.842
	CNS0095603	Golden flower (diploid) 3	33.894
	CNS0095604	Slightly white alabastrum(tetraploid) 1	66.073
	CNS0095605	Slightly white alabastrum(tetraploid) 2	64.030
	CNS0095606	Slightly white alabastrum(tetraploid) 3	68.734
	CNS0095607	Whole white alabastrum(tetraploid) 1	38.427
	CNS0095608	Whole white alabastrum(tetraploid) 2	32.231
	CNS0095609	Whole white alabastrum(tetraploid) 3	56.103
	CNS0095610	Silvery flower (tetraploid) 1	31.455
	CNS0095611	Silvery flower (tetraploid) 2	34.849
	CNS0095612	Silvery flower (tetraploid) 3	15.852
	CNS0095613	Golden flower (tetraploid) 1	20.186
	CNS0095614	Golden flower (tetraploid) 2	32.474
	CNS0095615	Golden flower (tetraploid) 3	12.656
CRA001975	CRR073297	Stem 1	50.792
	CRR073298	Stem 2	46.166
	CRR073299	Stem 3	53.785
	CRR073300	Leaf 1	47.035
	CRR073301	Leaf 2	49.597
	CRR073302	Leaf 3	65.624
	CRR073303	Juvenile bud 1	51.933
	CRR073304	Juvenile bud 2	52.731
	CRR073305	Juvenile bud 3	46.814
	CRR073306	Third green 1	10.022
	CRR073307	Third green 2	12.898
	CRR073308	Third green 3	14.746
	CRR073309	Second white 1	8.938
	CRR073310	Second white 2	5.041
	CRR073311	Second white 3	4.630
	CRR073312	Silver flowering 1	1.954
	CRR073313	Silver flowering 2	3.972
	CRR073314	Silver flowering 3	3.366
	CRR073315	Gold flowering 1	64.088
	CRR073316	Gold flowering 2	70.890
	CRR073317	Gold flowering 3	55.306
	CRR073318	Tawny withering 1	74.791
	CRR073319	Tawny withering 2	81.625
	CRR073320	Tawny withering 3	71.524