Detail information of GWHGAAZE017670


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283880.10PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Vitis vinifera]
Swissprottr|P0DI13|SA1B2_ARATH3E-174SUMO-activating enzyme subunit 1B-2
trEMBLtr|D7SGZ8|D7SGZ8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI15678.3}
TAIR10AT5G50580.28E-139SUMO-activating enzyme 1B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene94540419457840-
GWHAAZE00000005mRNA94540419457840-
GWHAAZE00000005exon94540419454200-
GWHAAZE00000005exon94543029454406-
GWHAAZE00000005exon94545009454603-
GWHAAZE00000005exon94550339455099-
GWHAAZE00000005exon94552689455318-
GWHAAZE00000005exon94556909455806-
GWHAAZE00000005exon94559779456029-
GWHAAZE00000005exon94563559456550-
GWHAAZE00000005exon94575579457608-
GWHAAZE00000005exon94577589457840-
GWHAAZE00000005CDS94577589457840-
GWHAAZE00000005CDS94575579457608-
GWHAAZE00000005CDS94563559456550-
GWHAAZE00000005CDS94559779456029-
GWHAAZE00000005CDS94556909455806-
GWHAAZE00000005CDS94552689455318-
GWHAAZE00000005CDS94550339455099-
GWHAAZE00000005CDS94545009454603-
GWHAAZE00000005CDS94543029454406-
GWHAAZE00000005CDS94540969454200-
GWHAAZE00000005three_prime_UTR94540419454095-
Transcript Sequence

Network for GWHGAAZE017670

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00899.22ThiF142971.90E-18
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyThiF

KEGG pathway

KO Enzyme pathway mapID
K10684UBLE1A, SAE1 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName
GO:0008641molecular_functionubiquitin-like modifier activating enzyme activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf61.925
SRR3591706second leaf50.877
SRR3591707mature leaf29.479
SRR3591708Shoot apex90.861
SRR3591709Stem47.353
SRR3591710White floral bud32.933
SRR3591711White flower36.376
SRR3591712Green floral bud42.200
SRR3591713Yellow flower33.839
SRP173429 SRR8316895Juvenile bud stage 44.385
SRR8316896Juvenile bud stage 51.161
SRR8316897Juvenile bud stage 26.388
SRR8316894Third green stage 18.421
SRR8316900Third green stage 44.692
SRR8316901Third green stage 47.719
SRR8316898Complete white stage 15.935
SRR8316899Complete white stage 70.386
SRR8316903Complete white stage 24.721
SRR8316902Silver flowering stage17.287
SRR8316904Silver flowering stage19.089
SRR8316905Silver flowering stage9.843
SRR8316906Gold flowering stage 33.205
SRR8316907Gold flowering stage 31.694
SRR8316908Gold flowering stage 37.864
SRP132670SRR6706286Control22.651
SRR6706287Light intensity 50%20.677
SRR6706288Light intensity 20%24.811
CNP0000432CNS0095592Slightly white alabastrum(diploid) 141.401
CNS0095593Slightly white alabastrum(diploid) 241.957
CNS0095594Slightly white alabastrum(diploid) 344.292
CNS0095595Whole white alabastrum(diploid) 230.696
CNS0095596Whole white alabastrum(diploid) 329.521
CNS0095597Whole white alabastrum(diploid) 425.917
CNS0095598Silvery flower (diploied) 137.473
CNS0095599Silvery flower (diploied) 236.106
CNS0095600Silvery flower (diploied) 332.536
CNS0095601Golden flower (diploid) 131.771
CNS0095602Golden flower (diploid) 237.288
CNS0095603Golden flower (diploid) 335.970
CNS0095604Slightly white alabastrum(tetraploid) 142.583
CNS0095605Slightly white alabastrum(tetraploid) 233.075
CNS0095606Slightly white alabastrum(tetraploid) 367.302
CNS0095607Whole white alabastrum(tetraploid) 122.186
CNS0095608Whole white alabastrum(tetraploid) 218.697
CNS0095609Whole white alabastrum(tetraploid) 338.494
CNS0095610Silvery flower (tetraploid) 128.817
CNS0095611Silvery flower (tetraploid) 231.389
CNS0095612Silvery flower (tetraploid) 329.066
CNS0095613Golden flower (tetraploid) 123.196
CNS0095614Golden flower (tetraploid) 232.819
CNS0095615Golden flower (tetraploid) 321.856
CRA001975CRR073297Stem 140.695
CRR073298Stem 244.376
CRR073299Stem 347.812
CRR073300Leaf 131.609
CRR073301Leaf 226.900
CRR073302Leaf 343.482
CRR073303Juvenile bud 130.748
CRR073304Juvenile bud 220.314
CRR073305Juvenile bud 324.430
CRR073306Third green 17.036
CRR073307Third green 26.761
CRR073308Third green 37.860
CRR073309Second white 19.665
CRR073310Second white 215.599
CRR073311Second white 314.286
CRR073312Silver flowering 112.270
CRR073313Silver flowering 210.496
CRR073314Silver flowering 38.647
CRR073315Gold flowering 125.147
CRR073316Gold flowering 233.959
CRR073317Gold flowering 324.742
CRR073318Tawny withering 131.870
CRR073319Tawny withering 230.681
CRR073320Tawny withering 336.197