Gene detail

Detail information of GWHGAAZE017703

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002279988.1	0	PREDICTED: exocyst complex component EXO70B1 [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	8E-121	Exocyst complex component EXO70A1
trEMBL	tr\|F6GST9\|F6GST9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43324.1}
TAIR10	AT5G50380.1	0	exocyst subunit exo70 family protein F1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	9825232	9827208	-
GWHAAZE00000005	mRNA	9825232	9827208	-
GWHAAZE00000005	exon	9825232	9827208	-
GWHAAZE00000005	CDS	9825232	9827208	-

Transcript Sequence
>GWHTAAZE017723 ATGGCGACGACTATAGACGGAGAAGATAGGGTTATGGCTGCAGCTCAACGGATCGTACAAAGTCTCAACGCTCCTAAAAGCGAAAGGGAAGATATGATCTCTATTTTCTCGAGCTTCGATAATCGCTTATCAAACATCACCGATTTGATGTCTACACGCAAGGATCGTGCTGCTGCTGGTGGTAGTGATCATGAATCTGAATCTGAATCAGATGCTCGATTTGATGCGGCCGAGAAGGTGATTCTCCGGTGGGACTCCACCGGAGATTCATCGCACCACTCGTTGCCCTGGGAGGACTCGCCGGACGAGGCGGCTGAGTACCTTGCCGCCGTTGATGAGATTCTTCAACTCACCGAAGACCTTTCGATCCAATCCAAGGGAGATATTATGGATCGTGCCGAGAGTGCGCTCCAATTGGCTATGTCTCGTCTTGAAGACGAATTTAGGCATATTTTGATTAGGAGTACCTTACCTTTAGATGCTGACAGGCTATACGGTTCGATCCGTAGGGTTTCTCTTTCCTTCGATGGGGAAATTGGGGAGGATTTTGACAATTTTGTTGATGATAGGCCGTCATCGAGTTTGTGCCATGAGAGAGGTGCGAGCTTAGGGGATGATTTGTTTGTGGAGTTGATTAATTCTGATGCCATGGAGGAATTGAGGGATATTGCAGACCGGATGATTAGGTCGGGGTATGAGAAGGAGTGTTGTCAAGTTTATAGCAGTGTTCGTCGTGATGTTCTTGATGAGTGTATGACTATTTTGGGTGTTGAGAGGCTGAGTATTGAGGAAGTTCAGAGGATTGAGTGGGGGGTTTTGGATGAGAAGATGAAGAAGTGGGTTCAGGCTCTTAAGATTGTGGTTAGGGTTCTTTTGGCCGGTGAGAAACGGCTTTGCGAACAGATTTTCAGTGAGTCAGAATTGATTCAAGAAGTTTGCTTTGTTGAGACAACAAAGGGGTGTGTGATGCAGCTTTTGAATTTTGGTGAGGCTGTTGTTATTGGAAAGAGGTCTTCAGAGAAGCTGTTTCGTATATTGGATATGTATGATGTTATGTATGACGTTTTGCCAGATTTGGAAGCATTGTTTACAGATGAATCGGGGGAATTGGTGTGCAGTGAAGCGAAAGTAGTGCTGAGTGGACTGGGTGAGGCGGCCATAGGCACATTTGTGGAGTTTGAAAATGCTGTTCTTGGTGAGACATCGAGGAAACCGATGCAAGGTGGTGAGATTCACCCATTGACCCGATATGTAATGAATTACACGAAGTTACTTGTAGATTATAGTGATTCACTCAATGCCCTTTTGGGGAACGAAGAAAATGAATCTGTTCGTTCACAAGCTGTTGACGATGACGATAATCTGCAGTTAGAAACCATGTCTCCAATTGCAATCCGCCTGCTGAGGTTAATTACATCCCTGGAATCGAACATCGAGGAGAAGTCGAAACTATACGATGATAATGCAATGCAATATATATTCCTAATGAACAATATCCTGTACATGGTACAGAAAGTAAAAGACTCTGATCTTCGAAACATTTTAGGAGACCAGTGGATTCGTAAACGGCGTGGACAGGTTCGTCAATACGCCACTAGCTATCTCAGAGCTTCATGGAGCAAGGTCTTGTCTTGTTTGAAGGATGAGGGGATTGGTGGGAGCACGGGTAATGCCTCAAAGGTGGCTCTAAAGGAGAGGTTCAAGAACTTCAATGCTTGTTTCGAAGATATTTATAAGACCCAAACGGGTTGGAAGGTCCCCGATGCTCAGCTTCGAGAAGAACTTCGAATATCCATTTCAGAGAAAGTTCTTCCTGCTTATCGATCATTTATGGGAAGATTTGGGAGTCAACTAGAGAATGGAAGGCATGCTGGGAAATATATAAAGTTCACTCCAGATGATTTGGAGACCTATCTTTTGGATCTGTTTGAAGGAACGCCCATCATTCTGAACAACATGAGAAGAAAAAGCTCATGA

Network for GWHGAAZE017703

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0005

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	278	640	5.50E-130

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.533
	SRR3591706	second leaf	10.868
	SRR3591707	mature leaf	19.865
	SRR3591708	Shoot apex	17.090
	SRR3591709	Stem	27.696
	SRR3591710	White floral bud	28.871
	SRR3591711	White flower	40.114
	SRR3591712	Green floral bud	20.937
	SRR3591713	Yellow flower	41.993
SRP173429	SRR8316895	Juvenile bud stage	11.595
	SRR8316896	Juvenile bud stage	15.766
	SRR8316897	Juvenile bud stage	6.320
	SRR8316894	Third green stage	8.095
	SRR8316900	Third green stage	20.862
	SRR8316901	Third green stage	20.482
	SRR8316898	Complete white stage	14.285
	SRR8316899	Complete white stage	38.917
	SRR8316903	Complete white stage	23.924
	SRR8316902	Silver flowering stage	13.445
	SRR8316904	Silver flowering stage	25.345
	SRR8316905	Silver flowering stage	11.337
	SRR8316906	Gold flowering stage	36.876
	SRR8316907	Gold flowering stage	35.093
	SRR8316908	Gold flowering stage	45.763
SRP132670	SRR6706286	Control	23.281
	SRR6706287	Light intensity 50%	24.074
	SRR6706288	Light intensity 20%	23.555
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	13.197
	CNS0095593	Slightly white alabastrum(diploid) 2	12.556
	CNS0095594	Slightly white alabastrum(diploid) 3	14.288
	CNS0095595	Whole white alabastrum(diploid) 2	13.103
	CNS0095596	Whole white alabastrum(diploid) 3	8.668
	CNS0095597	Whole white alabastrum(diploid) 4	13.605
	CNS0095598	Silvery flower (diploied) 1	22.252
	CNS0095599	Silvery flower (diploied) 2	18.012
	CNS0095600	Silvery flower (diploied) 3	46.978
	CNS0095601	Golden flower (diploid) 1	22.825
	CNS0095602	Golden flower (diploid) 2	53.694
	CNS0095603	Golden flower (diploid) 3	49.460
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.236
	CNS0095605	Slightly white alabastrum(tetraploid) 2	10.370
	CNS0095606	Slightly white alabastrum(tetraploid) 3	33.697
	CNS0095607	Whole white alabastrum(tetraploid) 1	9.215
	CNS0095608	Whole white alabastrum(tetraploid) 2	8.909
	CNS0095609	Whole white alabastrum(tetraploid) 3	20.356
	CNS0095610	Silvery flower (tetraploid) 1	50.789
	CNS0095611	Silvery flower (tetraploid) 2	49.668
	CNS0095612	Silvery flower (tetraploid) 3	42.049
	CNS0095613	Golden flower (tetraploid) 1	31.079
	CNS0095614	Golden flower (tetraploid) 2	51.488
	CNS0095615	Golden flower (tetraploid) 3	47.968
CRA001975	CRR073297	Stem 1	25.123
	CRR073298	Stem 2	23.560
	CRR073299	Stem 3	27.661
	CRR073300	Leaf 1	32.720
	CRR073301	Leaf 2	29.955
	CRR073302	Leaf 3	24.410
	CRR073303	Juvenile bud 1	28.315
	CRR073304	Juvenile bud 2	26.566
	CRR073305	Juvenile bud 3	42.798
	CRR073306	Third green 1	41.549
	CRR073307	Third green 2	30.927
	CRR073308	Third green 3	33.757
	CRR073309	Second white 1	38.310
	CRR073310	Second white 2	27.296
	CRR073311	Second white 3	30.287
	CRR073312	Silver flowering 1	34.224
	CRR073313	Silver flowering 2	28.986
	CRR073314	Silver flowering 3	27.943
	CRR073315	Gold flowering 1	14.844
	CRR073316	Gold flowering 2	22.695
	CRR073317	Gold flowering 3	25.333
	CRR073318	Tawny withering 1	30.212
	CRR073319	Tawny withering 2	29.904
	CRR073320	Tawny withering 3	23.908