Detail information of GWHGAAZE017723


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010663041.18.28448E-86PREDICTED: uncharacterized protein LOC104882266 isoform X1 [Vitis vinifera]
Swissprottr|Q5N6V0|Y1054_ORYSJ9E-16B3 domain-containing protein Os01g0905400
trEMBLtr|D7SHB6|D7SHB6_VITVI3E-86Putative uncharacterized protein {ECO:0000313|EMBL:CBI14875.3}
TAIR10AT3G18960.19E-10AP2/B3-like transcriptional factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1005071910054617-
GWHAAZE00000005mRNA1005071910054617-
GWHAAZE00000005exon1005460610054617-
GWHAAZE00000005exon1005189810053086-
GWHAAZE00000005exon1005150910051577-
GWHAAZE00000005exon1005121710051392-
GWHAAZE00000005exon1005071910051035-
GWHAAZE00000005CDS1005460610054617-
GWHAAZE00000005CDS1005189810053086-
GWHAAZE00000005CDS1005150910051577-
GWHAAZE00000005CDS1005121710051392-
GWHAAZE00000005CDS1005078710051035-
GWHAAZE00000005three_prime_UTR1005071910050786-
Transcript Sequence

Network for GWHGAAZE017723

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B36811.10E-13
PF02362.22B34965632.30E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.610
SRR3591706second leaf0.187
SRR3591707mature leaf0.312
SRR3591708Shoot apex3.514
SRR3591709Stem1.256
SRR3591710White floral bud1.488
SRR3591711White flower1.539
SRR3591712Green floral bud1.673
SRR3591713Yellow flower0.643
SRP173429 SRR8316895Juvenile bud stage 5.493
SRR8316896Juvenile bud stage 6.276
SRR8316897Juvenile bud stage 2.628
SRR8316894Third green stage 2.319
SRR8316900Third green stage 5.328
SRR8316901Third green stage 4.440
SRR8316898Complete white stage 0.466
SRR8316899Complete white stage 5.594
SRR8316903Complete white stage 0.662
SRR8316902Silver flowering stage0.238
SRR8316904Silver flowering stage0.413
SRR8316905Silver flowering stage0.116
SRR8316906Gold flowering stage 0.739
SRR8316907Gold flowering stage 0.347
SRR8316908Gold flowering stage 0.518
SRP132670SRR6706286Control4.076
SRR6706287Light intensity 50%3.667
SRR6706288Light intensity 20%4.120
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.748
CNS0095593Slightly white alabastrum(diploid) 24.597
CNS0095594Slightly white alabastrum(diploid) 36.763
CNS0095595Whole white alabastrum(diploid) 24.897
CNS0095596Whole white alabastrum(diploid) 33.839
CNS0095597Whole white alabastrum(diploid) 44.191
CNS0095598Silvery flower (diploied) 19.612
CNS0095599Silvery flower (diploied) 25.125
CNS0095600Silvery flower (diploied) 33.421
CNS0095601Golden flower (diploid) 15.938
CNS0095602Golden flower (diploid) 23.899
CNS0095603Golden flower (diploid) 34.937
CNS0095604Slightly white alabastrum(tetraploid) 16.707
CNS0095605Slightly white alabastrum(tetraploid) 24.397
CNS0095606Slightly white alabastrum(tetraploid) 312.455
CNS0095607Whole white alabastrum(tetraploid) 13.694
CNS0095608Whole white alabastrum(tetraploid) 22.982
CNS0095609Whole white alabastrum(tetraploid) 36.699
CNS0095610Silvery flower (tetraploid) 12.943
CNS0095611Silvery flower (tetraploid) 25.053
CNS0095612Silvery flower (tetraploid) 32.167
CNS0095613Golden flower (tetraploid) 11.850
CNS0095614Golden flower (tetraploid) 22.120
CNS0095615Golden flower (tetraploid) 31.070
CRA001975CRR073297Stem 13.724
CRR073298Stem 23.844
CRR073299Stem 32.808
CRR073300Leaf 13.566
CRR073301Leaf 22.935
CRR073302Leaf 31.922
CRR073303Juvenile bud 11.222
CRR073304Juvenile bud 20.799
CRR073305Juvenile bud 32.256
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.158
CRR073309Second white 10.063
CRR073310Second white 20.455
CRR073311Second white 30.131
CRR073312Silver flowering 10.027
CRR073313Silver flowering 20.227
CRR073314Silver flowering 30.280
CRR073315Gold flowering 11.687
CRR073316Gold flowering 20.852
CRR073317Gold flowering 30.505
CRR073318Tawny withering 10.615
CRR073319Tawny withering 20.577
CRR073320Tawny withering 31.386