Gene detail

Detail information of GWHGAAZE017741

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002280826.1	0	PREDICTED: exocyst complex component EXO70B1 [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	4E-92	Exocyst complex component EXO70A1
trEMBL	tr\|F6GSY9\|F6GSY9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43030.1}
TAIR10	AT5G61010.2	1E-148	exocyst subunit exo70 family protein E2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	10238928	10240826	+
GWHAAZE00000005	mRNA	10238928	10240826	+
GWHAAZE00000005	exon	10238928	10240826	+
GWHAAZE00000005	CDS	10238928	10240826	+

Transcript Sequence
>GWHTAAZE017761 ATGGGGGATTCTGAAACCATAATCCCAACTGATGCGGGGGAAAAACACATAATTGCTGCAGCGCAGCACATTTTGAAGGCTTTAGCAGTGAGTAAGAATGTGAGTAATGATATGAGAAAAGTCCTAGCGGATCTCGACTCTCATTTGTCCACAATGGCCAAACTCCCTGAGATTGAGTCTGACCGGACTAGAGAGATTGAAGATCGGCTCAAATGTGCTCAGAAGAAAGTCATTACTTGGCAATCAAATCAGTCAAAGATATGGGATTCTGGTCCTCATGTAGCATCAGAATATTTACAAGCGGTTGATGAAATTCGAAGGTTGATAGAAACTTTGGAGTTTATTTCGAACAAAAATGGCAAAGAGAAGGAGATTCTTGACCGAGCTCATACTGTCTTACAGATGGCAATGGCAAGGCTTGAAGAAGAGTTAATCCACATTCTTGCCCAGAATAAGCTTTCTTTTGAGCCGGAATTCACTTCTTTCCATTCTTGTGAAGAGAGTGCTGTGTATGATGAATCACTTGTTTCGACAGAAGATGGTTCTGTTGAGGGTAATTCTCGAAGGGAGAGCAGTGGCACTGAATCTGAGGGATTTATAACAGATTTGGTCCATCCGGATGTGATTCCAGATATCAAATCCATTGCGAACATAATGTTTGTATCACATTATGATCAGGAATTGTGCGAAGCTTTCATTTGCTTCTGGAAAGTTGCACTAGATGAGTATTTGATCATTCTTGGTGTGGAAAAACTCGGGACTGAGACCTTGGTGAAAATGGAGTGGGTTAGTTTGAGCAGCAAGATCAAGAAATGGTGTCGGGCAATTAAGGTTATTGTTCGATTCTTTCTTGCTGGCAAAAAAAGGCTATTTGACCAAATCTTGGGAGATTTCGGGTCTACAAGTTCAACTTGTTTTGTTGAAGCTTCGAGGGCTTCAATGTTGTGCCTACTGGATTTTGGCGAAGCTGTAGCTATTGGCCCTCATCAACCCGAAAGGCTTTTTCGCTTGGTTGACATGTACGAGGTTCTATCGAATCTTATCCAAGATTTAGATGTCTTATTTGCAGGCGAGGTTGGTTCTTTCCTTAGAACTGAGTTCCATGAACTATCAAGAAGATTAGCAAATACTGTGAGGGCAACATTCGTTGAATTTGGGAATCAAGTTGCCTCTAGAACTTCTTTAACTCCTTTTCCAAAAGGTGGCATTCACCATCTCACCAAGTATGTGATGAACTACATCAAACTTGTTGCTGTATATAGCGATGCCCTCGTTTTGCTCCTTGAGAAGGAGCAAGATGAGGGGAGATTGGACAGCATAGATGAAGGACCTCCCGTTTCTCATCCAATGGCTCACCATCTATGGTCACTGATGTCCATCTTAGAAACCAACCTCGAGAATAAATCCAATCTATACAGAGATGGTTCTCTAAAGCATATATTCATGTTAAACAACATCCATTATATGGTCCATAAAGTTAGAGACTCCGAACTTGCAACATACTTTGGTGATGAATGGATTCGAAACCATATCGCTAAATTTCAGCAACATGCAACAAGCTATGTGAGAGTCACTTGGTCTTCGGTACTTTCTTTGCTTGAGGAAAATGGAAACAGAGGAAAAGGAGTTCTTAAGGAGAGGTGCAGGGATTTCACCAATGCTTTTGAGGAAGTATATAAGAGCCAGACAGGGTGGTGTGTCCCTCATCTCGAGCTCCGTGAAGATTTACAAATTTCGGTTTCCCAGAAAGTCATCCATGCGTACCGGACTTTCCTCGGTAGAAACAACACTTCCATTAGTGAGAAGCACATTAAGTACACTGCGGATGAACTGGAGCTTTATATATTGGATCTCTTTGGAGGGGTGTCAAGATCGTTGCGCTATCCCCGTAGGAGGTGA

Network for GWHGAAZE017741

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	270	616	1.80E-106

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	6.261
	SRR3591706	second leaf	1.702
	SRR3591707	mature leaf	3.096
	SRR3591708	Shoot apex	3.466
	SRR3591709	Stem	10.121
	SRR3591710	White floral bud	4.779
	SRR3591711	White flower	9.982
	SRR3591712	Green floral bud	1.999
	SRR3591713	Yellow flower	7.782
SRP173429	SRR8316895	Juvenile bud stage	12.292
	SRR8316896	Juvenile bud stage	4.618
	SRR8316897	Juvenile bud stage	7.052
	SRR8316894	Third green stage	1.906
	SRR8316900	Third green stage	0.977
	SRR8316901	Third green stage	2.587
	SRR8316898	Complete white stage	0.703
	SRR8316899	Complete white stage	8.004
	SRR8316903	Complete white stage	0.838
	SRR8316902	Silver flowering stage	0.531
	SRR8316904	Silver flowering stage	0.917
	SRR8316905	Silver flowering stage	0.251
	SRR8316906	Gold flowering stage	3.258
	SRR8316907	Gold flowering stage	1.135
	SRR8316908	Gold flowering stage	4.749
SRP132670	SRR6706286	Control	0.915
	SRR6706287	Light intensity 50%	0.843
	SRR6706288	Light intensity 20%	0.564
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.246
	CNS0095593	Slightly white alabastrum(diploid) 2	8.061
	CNS0095594	Slightly white alabastrum(diploid) 3	6.547
	CNS0095595	Whole white alabastrum(diploid) 2	7.844
	CNS0095596	Whole white alabastrum(diploid) 3	0.256
	CNS0095597	Whole white alabastrum(diploid) 4	4.410
	CNS0095598	Silvery flower (diploied) 1	7.001
	CNS0095599	Silvery flower (diploied) 2	15.305
	CNS0095600	Silvery flower (diploied) 3	6.412
	CNS0095601	Golden flower (diploid) 1	12.355
	CNS0095602	Golden flower (diploid) 2	13.248
	CNS0095603	Golden flower (diploid) 3	13.977
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.681
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.476
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.281
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.922
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.377
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.626
	CNS0095610	Silvery flower (tetraploid) 1	1.746
	CNS0095611	Silvery flower (tetraploid) 2	1.259
	CNS0095612	Silvery flower (tetraploid) 3	1.145
	CNS0095613	Golden flower (tetraploid) 1	1.151
	CNS0095614	Golden flower (tetraploid) 2	2.653
	CNS0095615	Golden flower (tetraploid) 3	0.788
CRA001975	CRR073297	Stem 1	1.717
	CRR073298	Stem 2	1.684
	CRR073299	Stem 3	1.465
	CRR073300	Leaf 1	2.602
	CRR073301	Leaf 2	1.996
	CRR073302	Leaf 3	1.435
	CRR073303	Juvenile bud 1	1.423
	CRR073304	Juvenile bud 2	1.024
	CRR073305	Juvenile bud 3	3.435
	CRR073306	Third green 1	0.137
	CRR073307	Third green 2	0.143
	CRR073308	Third green 3	0.700
	CRR073309	Second white 1	0.656
	CRR073310	Second white 2	1.351
	CRR073311	Second white 3	1.785
	CRR073312	Silver flowering 1	7.029
	CRR073313	Silver flowering 2	3.814
	CRR073314	Silver flowering 3	3.720
	CRR073315	Gold flowering 1	1.691
	CRR073316	Gold flowering 2	5.066
	CRR073317	Gold flowering 3	6.663
	CRR073318	Tawny withering 1	12.299
	CRR073319	Tawny withering 2	27.566
	CRR073320	Tawny withering 3	6.018