Detail information of GWHGAAZE017798


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP32824.11.33444E-55hypothetical protein JCGZ_12116 [Jatropha curcas]
Swissprottr|Q9LXQ8|FBL60_ARATH0.00000002F-box/LRR-repeat protein At3g58940
trEMBLtr|A0A067KLZ8|A0A067KLZ8_JATCU5E-56Uncharacterized protein {ECO:0000313|EMBL:KDP32824.1}
TAIR10AT3G58940.10.00000005F-box/RNI-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1092192410924060+
GWHAAZE00000005mRNA1092192410924060+
GWHAAZE00000005exon1092192410922511+
GWHAAZE00000005exon1092262910922772+
GWHAAZE00000005exon1092376410924060+
GWHAAZE00000005CDS1092192410922511+
GWHAAZE00000005CDS1092262910922772+
GWHAAZE00000005CDS1092376410924060+
Transcript Sequence

Network for GWHGAAZE017798

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0228


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08387.11FBD2652981.00E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.208
SRR3591707mature leaf0.070
SRR3591708Shoot apex1.311
SRR3591709Stem0.689
SRR3591710White floral bud1.763
SRR3591711White flower2.092
SRR3591712Green floral bud0.339
SRR3591713Yellow flower2.573
SRP173429 SRR8316895Juvenile bud stage 1.357
SRR8316896Juvenile bud stage 2.388
SRR8316897Juvenile bud stage 1.076
SRR8316894Third green stage 0.972
SRR8316900Third green stage 3.941
SRR8316901Third green stage 2.646
SRR8316898Complete white stage 4.090
SRR8316899Complete white stage 6.325
SRR8316903Complete white stage 4.914
SRR8316902Silver flowering stage4.324
SRR8316904Silver flowering stage5.202
SRR8316905Silver flowering stage2.448
SRR8316906Gold flowering stage 5.982
SRR8316907Gold flowering stage 6.381
SRR8316908Gold flowering stage 6.022
SRP132670SRR6706286Control3.118
SRR6706287Light intensity 50%2.809
SRR6706288Light intensity 20%3.495
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.626
CNS0095593Slightly white alabastrum(diploid) 22.441
CNS0095594Slightly white alabastrum(diploid) 31.631
CNS0095595Whole white alabastrum(diploid) 22.786
CNS0095596Whole white alabastrum(diploid) 32.615
CNS0095597Whole white alabastrum(diploid) 44.038
CNS0095598Silvery flower (diploied) 13.404
CNS0095599Silvery flower (diploied) 22.504
CNS0095600Silvery flower (diploied) 35.484
CNS0095601Golden flower (diploid) 13.839
CNS0095602Golden flower (diploid) 26.520
CNS0095603Golden flower (diploid) 36.348
CNS0095604Slightly white alabastrum(tetraploid) 15.161
CNS0095605Slightly white alabastrum(tetraploid) 26.046
CNS0095606Slightly white alabastrum(tetraploid) 35.288
CNS0095607Whole white alabastrum(tetraploid) 15.186
CNS0095608Whole white alabastrum(tetraploid) 23.442
CNS0095609Whole white alabastrum(tetraploid) 36.597
CNS0095610Silvery flower (tetraploid) 17.572
CNS0095611Silvery flower (tetraploid) 27.761
CNS0095612Silvery flower (tetraploid) 312.480
CNS0095613Golden flower (tetraploid) 18.804
CNS0095614Golden flower (tetraploid) 27.589
CNS0095615Golden flower (tetraploid) 39.840
CRA001975CRR073297Stem 13.096
CRR073298Stem 22.067
CRR073299Stem 32.108
CRR073300Leaf 12.941
CRR073301Leaf 23.210
CRR073302Leaf 32.193
CRR073303Juvenile bud 11.168
CRR073304Juvenile bud 21.354
CRR073305Juvenile bud 31.948
CRR073306Third green 11.379
CRR073307Third green 21.162
CRR073308Third green 31.263
CRR073309Second white 10.406
CRR073310Second white 24.213
CRR073311Second white 31.164
CRR073312Silver flowering 12.032
CRR073313Silver flowering 21.118
CRR073314Silver flowering 31.310
CRR073315Gold flowering 11.188
CRR073316Gold flowering 21.992
CRR073317Gold flowering 31.095
CRR073318Tawny withering 13.436
CRR073319Tawny withering 22.159
CRR073320Tawny withering 30.762