Detail information of GWHGAAZE017824


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002268569.11.7439E-133PREDICTED: transcription factor TCP15 [Vitis vinifera]
Swissprottr|Q9C9L2|TCP15_ARATH4E-59Transcription factor TCP15
trEMBLtr|F6GT89|F6GT89_VITVI7E-134Putative uncharacterized protein {ECO:0000313|EMBL:CCB43098.1}
TAIR10AT1G69690.19E-46TCP family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1123547411236744+
GWHAAZE00000005mRNA1123547411236744+
GWHAAZE00000005exon1123547411236272+
GWHAAZE00000005exon1123670711236744+
GWHAAZE00000005CDS1123547411236272+
GWHAAZE00000005CDS1123670711236744+
Transcript Sequence

Network for GWHGAAZE017824

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP682091.20E-39
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.113
SRR3591706second leaf25.982
SRR3591707mature leaf32.414
SRR3591708Shoot apex33.240
SRR3591709Stem16.024
SRR3591710White floral bud6.304
SRR3591711White flower5.808
SRR3591712Green floral bud10.468
SRR3591713Yellow flower2.671
SRP173429 SRR8316895Juvenile bud stage 9.714
SRR8316896Juvenile bud stage 8.394
SRR8316897Juvenile bud stage 5.360
SRR8316894Third green stage 4.602
SRR8316900Third green stage 7.864
SRR8316901Third green stage 6.246
SRR8316898Complete white stage 1.200
SRR8316899Complete white stage 18.512
SRR8316903Complete white stage 2.329
SRR8316902Silver flowering stage0.993
SRR8316904Silver flowering stage1.716
SRR8316905Silver flowering stage0.435
SRR8316906Gold flowering stage 2.008
SRR8316907Gold flowering stage 1.640
SRR8316908Gold flowering stage 0.955
SRP132670SRR6706286Control30.872
SRR6706287Light intensity 50%25.951
SRR6706288Light intensity 20%28.800
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.109
CNS0095593Slightly white alabastrum(diploid) 29.731
CNS0095594Slightly white alabastrum(diploid) 34.268
CNS0095595Whole white alabastrum(diploid) 23.417
CNS0095596Whole white alabastrum(diploid) 32.604
CNS0095597Whole white alabastrum(diploid) 44.198
CNS0095598Silvery flower (diploied) 14.691
CNS0095599Silvery flower (diploied) 21.827
CNS0095600Silvery flower (diploied) 32.634
CNS0095601Golden flower (diploid) 11.069
CNS0095602Golden flower (diploid) 24.056
CNS0095603Golden flower (diploid) 34.001
CNS0095604Slightly white alabastrum(tetraploid) 17.980
CNS0095605Slightly white alabastrum(tetraploid) 27.081
CNS0095606Slightly white alabastrum(tetraploid) 315.960
CNS0095607Whole white alabastrum(tetraploid) 15.327
CNS0095608Whole white alabastrum(tetraploid) 21.801
CNS0095609Whole white alabastrum(tetraploid) 34.069
CNS0095610Silvery flower (tetraploid) 13.033
CNS0095611Silvery flower (tetraploid) 22.746
CNS0095612Silvery flower (tetraploid) 31.294
CNS0095613Golden flower (tetraploid) 10.729
CNS0095614Golden flower (tetraploid) 22.400
CNS0095615Golden flower (tetraploid) 32.313
CRA001975CRR073297Stem 121.769
CRR073298Stem 219.338
CRR073299Stem 324.540
CRR073300Leaf 118.064
CRR073301Leaf 223.615
CRR073302Leaf 318.443
CRR073303Juvenile bud 116.673
CRR073304Juvenile bud 26.464
CRR073305Juvenile bud 330.809
CRR073306Third green 13.777
CRR073307Third green 28.514
CRR073308Third green 34.911
CRR073309Second white 10.436
CRR073310Second white 20.728
CRR073311Second white 30.202
CRR073312Silver flowering 10.472
CRR073313Silver flowering 20.489
CRR073314Silver flowering 30.000
CRR073315Gold flowering 136.363
CRR073316Gold flowering 239.452
CRR073317Gold flowering 337.412
CRR073318Tawny withering 122.869
CRR073319Tawny withering 214.199
CRR073320Tawny withering 324.025