Detail information of GWHGAAZE017825


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010663383.18.75931E-80PREDICTED: transcription factor bHLH47 [Vitis vinifera]
Swissprottr|Q9SN74|BH047_ARATH2E-46Transcription factor bHLH47
trEMBLtr|F6GT90|F6GT90_VITVI3E-80Putative uncharacterized protein {ECO:0000313|EMBL:CCB43099.1}
TAIR10AT3G47640.39E-29basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1125608311259138+
GWHAAZE00000005mRNA1125608311259138+
GWHAAZE00000005exon1125608311256153+
GWHAAZE00000005exon1125803811258156+
GWHAAZE00000005exon1125832311258450+
GWHAAZE00000005exon1125857811259138+
GWHAAZE00000005CDS1125608311256153+
GWHAAZE00000005CDS1125803811258156+
GWHAAZE00000005CDS1125832311258450+
GWHAAZE00000005CDS1125857811258991+
GWHAAZE00000005three_prime_UTR1125899211259138+
Transcript Sequence

Network for GWHGAAZE017825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.175
SRR3591706second leaf7.910
SRR3591707mature leaf20.339
SRR3591708Shoot apex14.060
SRR3591709Stem28.426
SRR3591710White floral bud21.526
SRR3591711White flower29.907
SRR3591712Green floral bud10.756
SRR3591713Yellow flower28.931
SRP173429 SRR8316895Juvenile bud stage 33.122
SRR8316896Juvenile bud stage 30.060
SRR8316897Juvenile bud stage 32.203
SRR8316894Third green stage 7.203
SRR8316900Third green stage 16.826
SRR8316901Third green stage 19.643
SRR8316898Complete white stage 8.563
SRR8316899Complete white stage 27.367
SRR8316903Complete white stage 12.630
SRR8316902Silver flowering stage14.369
SRR8316904Silver flowering stage12.438
SRR8316905Silver flowering stage6.363
SRR8316906Gold flowering stage 24.269
SRR8316907Gold flowering stage 30.456
SRR8316908Gold flowering stage 31.464
SRP132670SRR6706286Control13.639
SRR6706287Light intensity 50%12.888
SRR6706288Light intensity 20%12.735
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.749
CNS0095593Slightly white alabastrum(diploid) 227.690
CNS0095594Slightly white alabastrum(diploid) 330.178
CNS0095595Whole white alabastrum(diploid) 221.724
CNS0095596Whole white alabastrum(diploid) 310.528
CNS0095597Whole white alabastrum(diploid) 413.255
CNS0095598Silvery flower (diploied) 132.567
CNS0095599Silvery flower (diploied) 230.640
CNS0095600Silvery flower (diploied) 326.713
CNS0095601Golden flower (diploid) 124.442
CNS0095602Golden flower (diploid) 230.090
CNS0095603Golden flower (diploid) 328.362
CNS0095604Slightly white alabastrum(tetraploid) 110.966
CNS0095605Slightly white alabastrum(tetraploid) 212.417
CNS0095606Slightly white alabastrum(tetraploid) 314.578
CNS0095607Whole white alabastrum(tetraploid) 17.509
CNS0095608Whole white alabastrum(tetraploid) 28.166
CNS0095609Whole white alabastrum(tetraploid) 39.688
CNS0095610Silvery flower (tetraploid) 120.847
CNS0095611Silvery flower (tetraploid) 216.099
CNS0095612Silvery flower (tetraploid) 325.157
CNS0095613Golden flower (tetraploid) 118.597
CNS0095614Golden flower (tetraploid) 218.907
CNS0095615Golden flower (tetraploid) 316.459
CRA001975CRR073297Stem 124.144
CRR073298Stem 219.067
CRR073299Stem 326.354
CRR073300Leaf 116.470
CRR073301Leaf 224.804
CRR073302Leaf 318.467
CRR073303Juvenile bud 116.262
CRR073304Juvenile bud 216.833
CRR073305Juvenile bud 324.675
CRR073306Third green 132.017
CRR073307Third green 226.861
CRR073308Third green 326.331
CRR073309Second white 133.769
CRR073310Second white 235.696
CRR073311Second white 334.276
CRR073312Silver flowering 133.730
CRR073313Silver flowering 234.041
CRR073314Silver flowering 329.865
CRR073315Gold flowering 123.349
CRR073316Gold flowering 230.656
CRR073317Gold flowering 324.905
CRR073318Tawny withering 127.934
CRR073319Tawny withering 258.235
CRR073320Tawny withering 329.908