Detail information of GWHGAAZE017881


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011087175.10PREDICTED: betaine aldehyde dehydrogenase 1, chloroplastic [Sesamum indicum]
Swissprottr|Q9S795|BADH1_ARATH0Betaine aldehyde dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|Q6JSK3|Q6JSK3_PANGI0Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:AAQ76705.1}
TAIR10AT1G74920.10aldehyde dehydrogenase 10A8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1204245212048002-
GWHAAZE00000005mRNA1204245212048002-
GWHAAZE00000005exon1204245212042542-
GWHAAZE00000005exon1204274812042854-
GWHAAZE00000005exon1204298112043041-
GWHAAZE00000005exon1204316912043320-
GWHAAZE00000005exon1204340012043477-
GWHAAZE00000005exon1204428612044399-
GWHAAZE00000005exon1204487912044955-
GWHAAZE00000005exon1204517112045237-
GWHAAZE00000005exon1204532712045392-
GWHAAZE00000005exon1204551312045636-
GWHAAZE00000005exon1204573612045828-
GWHAAZE00000005exon1204636912046517-
GWHAAZE00000005exon1204659912046679-
GWHAAZE00000005exon1204727312047415-
GWHAAZE00000005exon1204789412048002-
GWHAAZE00000005CDS1204789412048002-
GWHAAZE00000005CDS1204727312047415-
GWHAAZE00000005CDS1204659912046679-
GWHAAZE00000005CDS1204636912046517-
GWHAAZE00000005CDS1204573612045828-
GWHAAZE00000005CDS1204551312045636-
GWHAAZE00000005CDS1204532712045392-
GWHAAZE00000005CDS1204517112045237-
GWHAAZE00000005CDS1204487912044955-
GWHAAZE00000005CDS1204428612044399-
GWHAAZE00000005CDS1204340012043477-
GWHAAZE00000005CDS1204316912043320-
GWHAAZE00000005CDS1204298112043041-
GWHAAZE00000005CDS1204274812042854-
GWHAAZE00000005CDS1204245212042542-
Transcript Sequence

Network for GWHGAAZE017881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00171.23Aldedh164853.80E-172
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00130betB, gbsA Metabolic pathways map01100
Glycine, serine and threonine metabolismmap00260

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf127.350
SRR3591706second leaf68.689
SRR3591707mature leaf58.359
SRR3591708Shoot apex80.927
SRR3591709Stem117.102
SRR3591710White floral bud176.962
SRR3591711White flower145.826
SRR3591712Green floral bud120.897
SRR3591713Yellow flower110.582
SRP173429 SRR8316895Juvenile bud stage 79.596
SRR8316896Juvenile bud stage 114.507
SRR8316897Juvenile bud stage 48.371
SRR8316894Third green stage 51.964
SRR8316900Third green stage 168.804
SRR8316901Third green stage 162.717
SRR8316898Complete white stage 93.218
SRR8316899Complete white stage 221.402
SRR8316903Complete white stage 136.098
SRR8316902Silver flowering stage161.111
SRR8316904Silver flowering stage169.775
SRR8316905Silver flowering stage106.671
SRR8316906Gold flowering stage 313.968
SRR8316907Gold flowering stage 277.768
SRR8316908Gold flowering stage 249.993
SRP132670SRR6706286Control190.341
SRR6706287Light intensity 50%191.526
SRR6706288Light intensity 20%202.554
CNP0000432CNS0095592Slightly white alabastrum(diploid) 178.391
CNS0095593Slightly white alabastrum(diploid) 283.113
CNS0095594Slightly white alabastrum(diploid) 371.555
CNS0095595Whole white alabastrum(diploid) 275.922
CNS0095596Whole white alabastrum(diploid) 375.008
CNS0095597Whole white alabastrum(diploid) 473.609
CNS0095598Silvery flower (diploied) 1104.621
CNS0095599Silvery flower (diploied) 2115.399
CNS0095600Silvery flower (diploied) 3313.553
CNS0095601Golden flower (diploid) 1128.715
CNS0095602Golden flower (diploid) 2233.194
CNS0095603Golden flower (diploid) 3230.333
CNS0095604Slightly white alabastrum(tetraploid) 199.453
CNS0095605Slightly white alabastrum(tetraploid) 276.475
CNS0095606Slightly white alabastrum(tetraploid) 3165.169
CNS0095607Whole white alabastrum(tetraploid) 168.361
CNS0095608Whole white alabastrum(tetraploid) 263.762
CNS0095609Whole white alabastrum(tetraploid) 3143.542
CNS0095610Silvery flower (tetraploid) 1293.052
CNS0095611Silvery flower (tetraploid) 2348.048
CNS0095612Silvery flower (tetraploid) 3730.101
CNS0095613Golden flower (tetraploid) 1305.591
CNS0095614Golden flower (tetraploid) 2494.443
CNS0095615Golden flower (tetraploid) 3330.084
CRA001975CRR073297Stem 1107.509
CRR073298Stem 2103.190
CRR073299Stem 3115.194
CRR073300Leaf 1153.062
CRR073301Leaf 2139.422
CRR073302Leaf 3163.651
CRR073303Juvenile bud 1178.317
CRR073304Juvenile bud 2161.057
CRR073305Juvenile bud 3209.915
CRR073306Third green 1769.438
CRR073307Third green 2395.775
CRR073308Third green 3468.655
CRR073309Second white 1636.327
CRR073310Second white 2574.690
CRR073311Second white 3432.518
CRR073312Silver flowering 1158.507
CRR073313Silver flowering 2124.831
CRR073314Silver flowering 3119.525
CRR073315Gold flowering 162.658
CRR073316Gold flowering 270.115
CRR073317Gold flowering 359.257
CRR073318Tawny withering 187.931
CRR073319Tawny withering 262.468
CRR073320Tawny withering 369.067