Gene detail

Detail information of GWHGAAZE017913

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009627985.1	0	PREDICTED: peroxisomal membrane protein PEX14 isoform X1 [Nicotiana tomentosiformis]
Swissprot	tr\|Q9FXT6\|PEX14_ARATH	5E-123	Peroxisomal membrane protein PEX14
trEMBL	tr\|A0A068UVR8\|A0A068UVR8_COFCA	1E-173	Coffea canephora DH200=94 genomic scaffold, scaffold_64 {ECO:0000313\|EMBL:CDP12402.1}
TAIR10	AT5G62810.1	2E-77	peroxin 14

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	12430217	12434335	+
GWHAAZE00000005	mRNA	12430217	12434335	+
GWHAAZE00000005	exon	12430217	12430274	+
GWHAAZE00000005	exon	12431309	12431553	+
GWHAAZE00000005	exon	12431630	12431678	+
GWHAAZE00000005	exon	12431766	12431959	+
GWHAAZE00000005	exon	12432092	12432284	+
GWHAAZE00000005	exon	12432417	12432506	+
GWHAAZE00000005	exon	12432626	12432675	+
GWHAAZE00000005	exon	12432801	12432843	+
GWHAAZE00000005	exon	12432940	12433007	+
GWHAAZE00000005	exon	12433610	12433678	+
GWHAAZE00000005	exon	12433832	12434335	+
GWHAAZE00000005	CDS	12430217	12430274	+
GWHAAZE00000005	CDS	12431309	12431553	+
GWHAAZE00000005	CDS	12431630	12431678	+
GWHAAZE00000005	CDS	12431766	12431959	+
GWHAAZE00000005	CDS	12432092	12432284	+
GWHAAZE00000005	CDS	12432417	12432506	+
GWHAAZE00000005	CDS	12432626	12432675	+
GWHAAZE00000005	CDS	12432801	12432843	+
GWHAAZE00000005	CDS	12432940	12433007	+
GWHAAZE00000005	CDS	12433610	12433678	+
GWHAAZE00000005	CDS	12433832	12434335	+

Transcript Sequence
>GWHTAAZE017933 ATGGCCACTCAATCCGCCCCTCCTCCAACTCCGACGGATGACAAAACCCAAAACCCAGCTTCAGAGGTTGTACAACAAACAGGCGGGGATCTGGAAGATGCCAAAAATGGGGCTACTAAAGAAAATTCACCAACATCAGTGTTTGTTAACTCAGAACCAATGCGAGAGGAGCAAGTGCAAAATGCTGTAAAGTTCCTTTCTCACCCAAAAGTTAAGGGATCTCCAGTCATCTACAGACGATCTTTTCTAGAGAGGAAGGGCCTCACAAAAGAGGAGATCGATGAAGCCTTTCGCCGTGTGCCTGATGCACCTCCAGCTGTTTCAACTACACAGCCAGTTGTTACAAATCAAGATGGGCAGTTGAAGTCATCGTTAAATAATCAACCACAAGTCCAAACTCAAGCTCTGAAGCCTGCACCACCTGCTCCTGCGGGTCCCGTTTCTAAATTGGGGATTTTTTCACCATCAAATTATCACTGGTCACACGCTCTTCTTGCCATAGGATTTCTTGCTGTTTCAGGGGCTGGAACAGCCATTATTTTTAAGAATTCAATTGTTCCAAGGTTGAAGTCTTGGATTCGCAAGGTTGTACTTGAAAAAGAAGAAGAGGACTCTGGGAAGAAAACTGAGTCAAAGCCAAGCTTGGCTGAAGAAGCAGCTGCTGCTGCAAAATCTGCTGCAGCTGCAGCCGCTGACGTGGCACGGGCAAGCCAGGATATGTTGATATCAAAAACTGAAGAGAAGAGATACTTTGGGGAACTTTTGAATATGTTAAATGCGCAAGTTCAGGAAATGAAGTCAATGAGTAATTCCATTCGGAAGCTGGAAGGGAAAAGTGAGAGAGTGCAAGAAGATAGAGTCCCAGTCACCAATTCAAGGCCCCCATATGCCAACGGAATGGCGGATACTGAAATGCGTTCAGCAAGACCTTTATCACCGCCTGCATCTGTGGAAACCTCTGTTGCACCTCATCCAAAATCCTATATGGAGGAAATTAATGATCAGCCGCCCAATCCTAATCAACCAGTATCTAATCCTCGCTTAACACCCAGACCTAAGCCTTGGGAGGTTAGTCAGGTTCAGAACAGCTCGACCAATGTTTTTCAGTCTCCGGGTAGCGTTGAATACGGCTTTAACCCCGACTTTCAAGAGAATGCAAATCAGTCAAACGGGGACGGTTCGGTGACTTGGTGGCAACAGAAGAACGTCAGAATCACGGAAATAGAGACGGACGGTGAAAACAGGAACTGGTCTTCAGGTGTGCCAATCAATGAGCGGCCACCAGCTCAGCGCTCATGGGTCCCCCCACAGCCGCCACCTGTCGCAATGGCAGAAGCAGCTGCTGCCATCAGACAGCCAAAAAAACCAGTGCTTCAGAATGAACAATTGACCGACGATCAGTTACTGGCTCGGTCTACAGAAGTAAGCGATGAATTGCAGAGGATCACGAAATTATCTGAATCGGGAGGAGGAGGTTTAATGGAAGCTGGTAATGGTGAGAGCTCTGTGCTGATGAATACAAGTGATATACATAAAGAAGGCAACTCTTACTTTGAGGCTTGA

Network for GWHGAAZE017913

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04695.14	Pex14_N	55	99	1.80E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13343	PEX14	Peroxisome	map04146

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	55.844
	SRR3591706	second leaf	32.997
	SRR3591707	mature leaf	45.239
	SRR3591708	Shoot apex	51.092
	SRR3591709	Stem	58.443
	SRR3591710	White floral bud	89.217
	SRR3591711	White flower	111.136
	SRR3591712	Green floral bud	38.712
	SRR3591713	Yellow flower	107.622
SRP173429	SRR8316895	Juvenile bud stage	32.921
	SRR8316896	Juvenile bud stage	42.173
	SRR8316897	Juvenile bud stage	17.718
	SRR8316894	Third green stage	14.271
	SRR8316900	Third green stage	46.119
	SRR8316901	Third green stage	39.633
	SRR8316898	Complete white stage	28.359
	SRR8316899	Complete white stage	64.845
	SRR8316903	Complete white stage	48.720
	SRR8316902	Silver flowering stage	30.647
	SRR8316904	Silver flowering stage	41.465
	SRR8316905	Silver flowering stage	23.218
	SRR8316906	Gold flowering stage	80.456
	SRR8316907	Gold flowering stage	81.904
	SRR8316908	Gold flowering stage	60.353
SRP132670	SRR6706286	Control	91.497
	SRR6706287	Light intensity 50%	70.882
	SRR6706288	Light intensity 20%	71.611
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	28.431
	CNS0095593	Slightly white alabastrum(diploid) 2	28.703
	CNS0095594	Slightly white alabastrum(diploid) 3	26.867
	CNS0095595	Whole white alabastrum(diploid) 2	26.363
	CNS0095596	Whole white alabastrum(diploid) 3	24.115
	CNS0095597	Whole white alabastrum(diploid) 4	23.510
	CNS0095598	Silvery flower (diploied) 1	61.850
	CNS0095599	Silvery flower (diploied) 2	61.937
	CNS0095600	Silvery flower (diploied) 3	105.748
	CNS0095601	Golden flower (diploid) 1	67.530
	CNS0095602	Golden flower (diploid) 2	105.553
	CNS0095603	Golden flower (diploid) 3	100.287
	CNS0095604	Slightly white alabastrum(tetraploid) 1	25.451
	CNS0095605	Slightly white alabastrum(tetraploid) 2	20.094
	CNS0095606	Slightly white alabastrum(tetraploid) 3	37.264
	CNS0095607	Whole white alabastrum(tetraploid) 1	18.980
	CNS0095608	Whole white alabastrum(tetraploid) 2	15.597
	CNS0095609	Whole white alabastrum(tetraploid) 3	34.594
	CNS0095610	Silvery flower (tetraploid) 1	70.929
	CNS0095611	Silvery flower (tetraploid) 2	96.888
	CNS0095612	Silvery flower (tetraploid) 3	73.464
	CNS0095613	Golden flower (tetraploid) 1	44.701
	CNS0095614	Golden flower (tetraploid) 2	65.511
	CNS0095615	Golden flower (tetraploid) 3	93.240
CRA001975	CRR073297	Stem 1	73.668
	CRR073298	Stem 2	70.666
	CRR073299	Stem 3	71.876
	CRR073300	Leaf 1	64.998
	CRR073301	Leaf 2	66.774
	CRR073302	Leaf 3	59.780
	CRR073303	Juvenile bud 1	81.721
	CRR073304	Juvenile bud 2	64.757
	CRR073305	Juvenile bud 3	89.413
	CRR073306	Third green 1	62.484
	CRR073307	Third green 2	42.205
	CRR073308	Third green 3	52.683
	CRR073309	Second white 1	69.092
	CRR073310	Second white 2	70.623
	CRR073311	Second white 3	69.653
	CRR073312	Silver flowering 1	49.574
	CRR073313	Silver flowering 2	34.821
	CRR073314	Silver flowering 3	40.315
	CRR073315	Gold flowering 1	86.843
	CRR073316	Gold flowering 2	106.959
	CRR073317	Gold flowering 3	64.010
	CRR073318	Tawny withering 1	53.827
	CRR073319	Tawny withering 2	53.233
	CRR073320	Tawny withering 3	39.281