Detail information of GWHGAAZE017923


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279079.10PREDICTED: pantothenate kinase 2 [Vitis vinifera]
Swissprottr|Q8L5Y9|PANK2_ARATH0Pantothenate kinase 2
trEMBLtr|F6GSM7|F6GSM7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB42974.1}
TAIR10AT4G32180.10pantothenate kinase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1249547112505037-
GWHAAZE00000005mRNA1249547112505037-
GWHAAZE00000005exon1249547112495915-
GWHAAZE00000005exon1249838412498455-
GWHAAZE00000005exon1249877612499016-
GWHAAZE00000005exon1249960612499699-
GWHAAZE00000005exon1250028812500390-
GWHAAZE00000005exon1250138612501544-
GWHAAZE00000005exon1250167212501818-
GWHAAZE00000005exon1250203612502099-
GWHAAZE00000005exon1250236012502476-
GWHAAZE00000005exon1250305212503134-
GWHAAZE00000005exon1250396512504013-
GWHAAZE00000005exon1250411812504162-
GWHAAZE00000005exon1250483812505037-
GWHAAZE00000005CDS1250483812505037-
GWHAAZE00000005CDS1250411812504162-
GWHAAZE00000005CDS1250396512504013-
GWHAAZE00000005CDS1250305212503134-
GWHAAZE00000005CDS1250236012502476-
GWHAAZE00000005CDS1250203612502099-
GWHAAZE00000005CDS1250167212501818-
GWHAAZE00000005CDS1250138612501544-
GWHAAZE00000005CDS1250028812500390-
GWHAAZE00000005CDS1249960612499699-
GWHAAZE00000005CDS1249877612499016-
GWHAAZE00000005CDS1249838412498455-
GWHAAZE00000005CDS1249582612495915-
GWHAAZE00000005three_prime_UTR1249547112495825-
Transcript Sequence

Network for GWHGAAZE017923

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01937.20DUF891424737.50E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09680coaW Metabolic pathways map01100
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.375
SRR3591706second leaf55.804
SRR3591707mature leaf61.350
SRR3591708Shoot apex59.240
SRR3591709Stem67.989
SRR3591710White floral bud73.610
SRR3591711White flower62.627
SRR3591712Green floral bud58.623
SRR3591713Yellow flower55.522
SRP173429 SRR8316895Juvenile bud stage 32.804
SRR8316896Juvenile bud stage 46.255
SRR8316897Juvenile bud stage 20.086
SRR8316894Third green stage 19.096
SRR8316900Third green stage 49.597
SRR8316901Third green stage 52.548
SRR8316898Complete white stage 18.807
SRR8316899Complete white stage 55.921
SRR8316903Complete white stage 39.456
SRR8316902Silver flowering stage25.855
SRR8316904Silver flowering stage31.490
SRR8316905Silver flowering stage17.502
SRR8316906Gold flowering stage 60.602
SRR8316907Gold flowering stage 50.346
SRR8316908Gold flowering stage 56.913
SRP132670SRR6706286Control55.596
SRR6706287Light intensity 50%53.165
SRR6706288Light intensity 20%54.841
CNP0000432CNS0095592Slightly white alabastrum(diploid) 159.445
CNS0095593Slightly white alabastrum(diploid) 260.339
CNS0095594Slightly white alabastrum(diploid) 354.622
CNS0095595Whole white alabastrum(diploid) 251.587
CNS0095596Whole white alabastrum(diploid) 347.742
CNS0095597Whole white alabastrum(diploid) 454.188
CNS0095598Silvery flower (diploied) 156.379
CNS0095599Silvery flower (diploied) 255.900
CNS0095600Silvery flower (diploied) 348.453
CNS0095601Golden flower (diploid) 151.584
CNS0095602Golden flower (diploid) 251.140
CNS0095603Golden flower (diploid) 348.213
CNS0095604Slightly white alabastrum(tetraploid) 154.947
CNS0095605Slightly white alabastrum(tetraploid) 263.472
CNS0095606Slightly white alabastrum(tetraploid) 366.745
CNS0095607Whole white alabastrum(tetraploid) 152.635
CNS0095608Whole white alabastrum(tetraploid) 243.126
CNS0095609Whole white alabastrum(tetraploid) 345.095
CNS0095610Silvery flower (tetraploid) 153.745
CNS0095611Silvery flower (tetraploid) 255.084
CNS0095612Silvery flower (tetraploid) 373.436
CNS0095613Golden flower (tetraploid) 151.154
CNS0095614Golden flower (tetraploid) 255.340
CNS0095615Golden flower (tetraploid) 346.725
CRA001975CRR073297Stem 151.836
CRR073298Stem 247.236
CRR073299Stem 344.007
CRR073300Leaf 168.358
CRR073301Leaf 265.400
CRR073302Leaf 351.020
CRR073303Juvenile bud 161.061
CRR073304Juvenile bud 240.760
CRR073305Juvenile bud 364.621
CRR073306Third green 154.646
CRR073307Third green 242.916
CRR073308Third green 351.681
CRR073309Second white 144.194
CRR073310Second white 237.437
CRR073311Second white 341.599
CRR073312Silver flowering 138.941
CRR073313Silver flowering 228.428
CRR073314Silver flowering 331.805
CRR073315Gold flowering 140.553
CRR073316Gold flowering 255.958
CRR073317Gold flowering 330.656
CRR073318Tawny withering 1105.075
CRR073319Tawny withering 2172.673
CRR073320Tawny withering 3108.532