Detail information of GWHGAAZE017954


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002322187.21.27529E-66hypothetical protein POPTR_0015s09370g [Populus trichocarpa]
Swissprottr|Q9FML4|LOB_ARATH1E-55Protein LATERAL ORGAN BOUNDARIES
trEMBLtr|B9IEW9|B9IEW9_POPTR5E-67Uncharacterized protein {ECO:0000313|EMBL:EEF06314.2}
TAIR10AT5G63090.44E-45Lateral organ boundaries (LOB) domain family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1284364412844102-
GWHAAZE00000005mRNA1284364412844102-
GWHAAZE00000005exon1284364412844102-
GWHAAZE00000005CDS1284364412844102-
Transcript Sequence

Network for GWHGAAZE017954

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB2862.40E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.786
SRR3591706second leaf0.000
SRR3591707mature leaf0.276
SRR3591708Shoot apex0.068
SRR3591709Stem0.000
SRR3591710White floral bud4.053
SRR3591711White flower7.733
SRR3591712Green floral bud0.247
SRR3591713Yellow flower0.888
SRP173429 SRR8316895Juvenile bud stage 0.669
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.396
SRR8316900Third green stage 0.197
SRR8316901Third green stage 0.101
SRR8316898Complete white stage 0.554
SRR8316899Complete white stage 2.063
SRR8316903Complete white stage 2.224
SRR8316902Silver flowering stage0.560
SRR8316904Silver flowering stage1.202
SRR8316905Silver flowering stage0.541
SRR8316906Gold flowering stage 3.432
SRR8316907Gold flowering stage 2.498
SRR8316908Gold flowering stage 0.899
SRP132670SRR6706286Control0.725
SRR6706287Light intensity 50%0.985
SRR6706288Light intensity 20%0.919
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.796
CNS0095593Slightly white alabastrum(diploid) 20.868
CNS0095594Slightly white alabastrum(diploid) 30.195
CNS0095595Whole white alabastrum(diploid) 20.434
CNS0095596Whole white alabastrum(diploid) 30.033
CNS0095597Whole white alabastrum(diploid) 41.306
CNS0095598Silvery flower (diploied) 11.562
CNS0095599Silvery flower (diploied) 23.827
CNS0095600Silvery flower (diploied) 32.071
CNS0095601Golden flower (diploid) 14.590
CNS0095602Golden flower (diploid) 23.632
CNS0095603Golden flower (diploid) 33.980
CNS0095604Slightly white alabastrum(tetraploid) 11.066
CNS0095605Slightly white alabastrum(tetraploid) 20.418
CNS0095606Slightly white alabastrum(tetraploid) 33.132
CNS0095607Whole white alabastrum(tetraploid) 11.542
CNS0095608Whole white alabastrum(tetraploid) 20.069
CNS0095609Whole white alabastrum(tetraploid) 30.155
CNS0095610Silvery flower (tetraploid) 15.793
CNS0095611Silvery flower (tetraploid) 23.786
CNS0095612Silvery flower (tetraploid) 33.597
CNS0095613Golden flower (tetraploid) 10.200
CNS0095614Golden flower (tetraploid) 211.671
CNS0095615Golden flower (tetraploid) 30.323
CRA001975CRR073297Stem 10.263
CRR073298Stem 20.599
CRR073299Stem 30.329
CRR073300Leaf 10.449
CRR073301Leaf 20.322
CRR073302Leaf 30.659
CRR073303Juvenile bud 10.237
CRR073304Juvenile bud 20.770
CRR073305Juvenile bud 38.144
CRR073306Third green 14.662
CRR073307Third green 22.118
CRR073308Third green 37.198
CRR073309Second white 11.223
CRR073310Second white 25.282
CRR073311Second white 32.408
CRR073312Silver flowering 10.149
CRR073313Silver flowering 20.332
CRR073314Silver flowering 31.746
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.368
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000