Detail information of GWHGAAZE018012


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009615434.10PREDICTED: probable galacturonosyltransferase 11 [Nicotiana tomentosiformis]
Swissprottr|Q949Q1|GAUTB_ARATH0Probable galacturonosyltransferase 11
trEMBLtr|A0A061FZ40|A0A061FZ40_THECC0Galacturonosyltransferase 11 {ECO:0000313|EMBL:EOY22142.1}
TAIR10AT1G18580.10galacturonosyltransferase 11

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1362468913627958+
GWHAAZE00000005mRNA1362468913627958+
GWHAAZE00000005exon1362468913625164+
GWHAAZE00000005exon1362650713627958+
GWHAAZE00000005five_prime_UTR1362468913625011+
GWHAAZE00000005CDS1362501213625164+
GWHAAZE00000005CDS1362650713627958+
Transcript Sequence

Network for GWHGAAZE018012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_82325072.30E-76
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13648GAUT Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.189
SRR3591706second leaf6.628
SRR3591707mature leaf7.155
SRR3591708Shoot apex5.389
SRR3591709Stem9.017
SRR3591710White floral bud13.817
SRR3591711White flower12.461
SRR3591712Green floral bud18.694
SRR3591713Yellow flower8.741
SRP173429 SRR8316895Juvenile bud stage 6.818
SRR8316896Juvenile bud stage 8.130
SRR8316897Juvenile bud stage 5.048
SRR8316894Third green stage 4.729
SRR8316900Third green stage 15.154
SRR8316901Third green stage 13.750
SRR8316898Complete white stage 6.071
SRR8316899Complete white stage 19.328
SRR8316903Complete white stage 9.388
SRR8316902Silver flowering stage5.116
SRR8316904Silver flowering stage6.886
SRR8316905Silver flowering stage2.304
SRR8316906Gold flowering stage 9.166
SRR8316907Gold flowering stage 10.096
SRR8316908Gold flowering stage 10.740
SRP132670SRR6706286Control9.147
SRR6706287Light intensity 50%9.375
SRR6706288Light intensity 20%8.970
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.562
CNS0095593Slightly white alabastrum(diploid) 212.734
CNS0095594Slightly white alabastrum(diploid) 313.646
CNS0095595Whole white alabastrum(diploid) 212.763
CNS0095596Whole white alabastrum(diploid) 315.354
CNS0095597Whole white alabastrum(diploid) 412.232
CNS0095598Silvery flower (diploied) 18.155
CNS0095599Silvery flower (diploied) 27.994
CNS0095600Silvery flower (diploied) 314.297
CNS0095601Golden flower (diploid) 14.956
CNS0095602Golden flower (diploid) 210.412
CNS0095603Golden flower (diploid) 39.996
CNS0095604Slightly white alabastrum(tetraploid) 19.657
CNS0095605Slightly white alabastrum(tetraploid) 210.468
CNS0095606Slightly white alabastrum(tetraploid) 310.141
CNS0095607Whole white alabastrum(tetraploid) 110.260
CNS0095608Whole white alabastrum(tetraploid) 211.086
CNS0095609Whole white alabastrum(tetraploid) 38.981
CNS0095610Silvery flower (tetraploid) 16.678
CNS0095611Silvery flower (tetraploid) 27.390
CNS0095612Silvery flower (tetraploid) 310.066
CNS0095613Golden flower (tetraploid) 14.962
CNS0095614Golden flower (tetraploid) 27.314
CNS0095615Golden flower (tetraploid) 38.692
CRA001975CRR073297Stem 19.903
CRR073298Stem 28.283
CRR073299Stem 36.244
CRR073300Leaf 113.456
CRR073301Leaf 29.873
CRR073302Leaf 310.730
CRR073303Juvenile bud 111.407
CRR073304Juvenile bud 29.991
CRR073305Juvenile bud 312.177
CRR073306Third green 15.603
CRR073307Third green 26.571
CRR073308Third green 36.616
CRR073309Second white 15.289
CRR073310Second white 26.924
CRR073311Second white 37.179
CRR073312Silver flowering 15.695
CRR073313Silver flowering 23.935
CRR073314Silver flowering 36.307
CRR073315Gold flowering 15.859
CRR073316Gold flowering 29.109
CRR073317Gold flowering 35.344
CRR073318Tawny withering 114.774
CRR073319Tawny withering 221.220
CRR073320Tawny withering 312.505