Gene detail

Detail information of GWHGAAZE018028

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010111987.1	5.34465E-70	Exocyst complex component 7 [Morus notabilis]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	5E-29	Exocyst complex component EXO70A1
trEMBL	tr\|W9SHH2\|W9SHH2_9ROSA	2E-70	Exocyst complex component 7 {ECO:0000313\|EMBL:EXC32298.1}
TAIR10	AT3G14090.1	1E-42	exocyst subunit exo70 family protein D3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	13833401	13834387	+
GWHAAZE00000005	mRNA	13833401	13834387	+
GWHAAZE00000005	exon	13833401	13834387	+
GWHAAZE00000005	CDS	13833401	13834387	+

Transcript Sequence
>GWHTAAZE018050 ATGGGTGGTCTATCTTTATCCGAGACACTATCAAGTACTTCTGTGAGTAGTGGTAGCGGCATCGAATATGATAATGCTGAAACAAGTGCCCTAACTTTGGACGCAGTACATGATCTGTGGAGTATTGCAGAGAGGATGAATTCCGCTGGTTATCTTGCTGAGTTCATTGACATTTATGCGAGTATAAGAAAATCTTTCCTTTCTGCCCATTTGAGACGATCTCGAATTCAGAAATTGAGCACCAGTGACACGCGGAGTCTGCTGTCGGACAAGTTTAATTTGCATATAGATAGGTGCATACAAGCATACAAGGTGTTCTACAAAATTATCTTTCCAAAGGAGTACAAACTCTCCATCCAAATATTTGATGGTACATTTAGTGATGTATGTCTTTCTAACACTGTTAAAGATGCTAAAGTTGAGCTAATGAACTTCGCGGAGGCTCTAATTAACACCCGTAGAGCACCGGAGAAGTTGTTCAAGCTTGTAAATCTCTTTAAGCAGCTGACTGATTTACCTGGGCTTTTAACAGAAGAAGCTGAACCTGTCCAAGGTTTGGCCTTTCAGCTTGTTGTGGTGGTGAGGGAAACTCTTTCAATTTTCGAGAAAACCGTGATTCATGAGGTGACGCCCGTACACGAAGAGGCCTCAGGAAGAATTCACCCCTTGATAAGGTATGTAATGAATTATATCACACTCATGGTGGATTATGAAGACATCCTATCTAATTTAATTGTATCAAATCCCCTTACATGTTTCCGAGATTTGATGATTCCGGTCCTTCCGGATGTGAAATTCGCAGAACATGAAGGGCAAAGTCCTCTTGCTCTCCATTTGGTTTTGATCGTTGTGGTCTTACGCTTCAAATTGGAGGCTAAGTCCAAGAACTACAAAGATGATGCCACTGTGCTTCATTTCTTTATGACCAACAATCTTCACTACATATTCTACAAAACTTCAAAAGCTCACCAAAGTTGGCAGCGATGA

Network for GWHGAAZE018028

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	98	318	1.60E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	3.639
	SRR3591706	second leaf	13.834
	SRR3591707	mature leaf	19.099
	SRR3591708	Shoot apex	10.852
	SRR3591709	Stem	12.686
	SRR3591710	White floral bud	1.494
	SRR3591711	White flower	2.681
	SRR3591712	Green floral bud	0.580
	SRR3591713	Yellow flower	0.325
SRP173429	SRR8316895	Juvenile bud stage	0.182
	SRR8316896	Juvenile bud stage	0.005
	SRR8316897	Juvenile bud stage	0.108
	SRR8316894	Third green stage	0.069
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.073
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.107
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.265
	SRR6706287	Light intensity 50%	0.162
	SRR6706288	Light intensity 20%	0.221
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.119
	CNS0095593	Slightly white alabastrum(diploid) 2	0.236
	CNS0095594	Slightly white alabastrum(diploid) 3	0.295
	CNS0095595	Whole white alabastrum(diploid) 2	0.133
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.073
	CNS0095598	Silvery flower (diploied) 1	0.147
	CNS0095599	Silvery flower (diploied) 2	0.779
	CNS0095600	Silvery flower (diploied) 3	0.229
	CNS0095601	Golden flower (diploid) 1	0.459
	CNS0095602	Golden flower (diploid) 2	0.291
	CNS0095603	Golden flower (diploid) 3	0.574
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.379
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.004
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.212
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.102
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.066
	CNS0095612	Silvery flower (tetraploid) 3	0.283
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.167
	CRR073299	Stem 3	0.063
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.220
	CRR073304	Juvenile bud 2	0.046
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.053
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.244
	CRR073316	Gold flowering 2	0.456
	CRR073317	Gold flowering 3	0.214
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	1.246
	CRR073320	Tawny withering 3	0.000