Gene detail

Detail information of GWHGAAZE018030

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009613007.1	1.225E-124	PREDICTED: exocyst complex component EXO70A1-like isoform X1 [Nicotiana tomentosiformis]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	2E-48	Exocyst complex component EXO70A1
trEMBL	tr\|M1A1D4\|M1A1D4_SOLTU	1E-122	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400012539}
TAIR10	AT3G14090.1	5E-81	exocyst subunit exo70 family protein D3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	13846236	13847888	+
GWHAAZE00000005	mRNA	13846236	13847888	+
GWHAAZE00000005	exon	13846236	13847888	+
GWHAAZE00000005	CDS	13846236	13847888	+

Transcript Sequence
>GWHTAAZE018052 ATGGAACCACAACCTTTTCCTTTAGAGTTAGCCATGGATCTAATATTCCGCTGGAAAGCTGAACCGGCCGAACAAGGATTTATCTCTGACTGGGATCGCTCTAAAATTCATCGCTACTTGCAAGCCGTTGACGAAGTGATGGAGTCAATGATAGTCAAAAATTGTCAAAGCCAATCCAAAGATGCCATGGATATGGCAGCGAGTCGGCTCAAGCACGAATTTCTGCACATACTGGAGAGAGTAACTGCGGCACAGGATGAGGATGTAAATACACGTGCGAGTTCTATGGTTCTGTCTTCAGTATCAAGTACTTCAGTGAGTGCCGGTGTTGAATTTGATCATCATGAAACAAGTGCTACAATTTTGGACGCGATTGATGATCTGGAGAATATTGCGCAGAGGATGAATTCCGCTGGTTATCTCGCTGACTTCATTGACATTTACACGGGTGTACGCAAGTCTTTCCTTGCTACCCATCTGAGACGAGTTGGGATTCAGAAATGGAGCACCAGTGACACGAGGGGTCTTGTGTCCGATGGGTATAATATGCATATTCGTGCGTGGACACAAGCATCCAAGGTGTTCTACAAAATTATCTTTCCAAAGGAGTACAAACTCTCCACCCAAATTTTTGATGCTCCATTTGGTGATAAATGTTTTTCTAATACTGTTAAAGATGCAAAAGTTGAGCTAATGAACTTTGCCGAGGCTCTAGTTAACACCCGTAGAGCACCGGAGAAGTTGTTCAAGCTTCTAGACCTCCATAATCAAATAGCGGATTTCTCGGTGCCTTTCCTAGGTTTACGCGTTCAGATTGTTGTGGCGGTCAGAGAAACTCTGTCAACTTTTGAGAATGCCGTGATTCATGAGGTGTCACCAGTTCACGAAGAGGACACCGGGAGAATCCACCCCCTGACAAGGTATGTAATGTATTATATCACACTCATGGTGGATTACGAAGACATCCTATCTACGTTAATTGTATCAAATCCGCCTACGTGTTTTGGAGATTTGATGATTCCAGATGTGAAATTCGCAGAACATGAAAGGCAAAATCCTCTTGCTCTCCATTTGGTTTTGATCGTTGTGGTCTTACGCTTCAAATTGGAGGCTAAGTCCAAGAACTTCAAAGACGATGCCTCTTTGCGTCATTTGTTCATGACCAACAATCTCCATTACATTCTACAACATGTCAAAAGCTCGCCAAAGTTGGAAGCGATGATTGGGGAAGACTATACAAAATACTTAAGTGAGTACTATTTAAAGCAGGCAAGTGCCGGCTATGAGAAATCAACCTGTGCGAGAATGTTGCACTGTTTAAGGGATGATGAGCCGCAATGGTTGCGCAAGTTTCTTTTTTCTTGGATGTCAGTGGTCACTTTGAGAAAGAGGATTAAGAAGTTTAATACTCTGTTTGAAGGGGTTCATTCCACTCAATCCAGATGGGGGGTGGAGGATTTCCAGTTACGGGCGGAGCTTCGTCTCTCAATAGTGGACAAATTGGTTCCTGCTTACAAGTCATTTCTTGAACGATACAACAGTCACATAGTGAAGAGAAAAGACTCTTGCTTCAATTACTTCGAGAACACATACGTAAAGTACTCGGCTGAGGAGCTTCAGGCTTTGATCTCTAAGGATTTCTTTGCAACATGA

Network for GWHGAAZE018030

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	187	544	2.60E-69

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.837
	SRR3591706	second leaf	1.987
	SRR3591707	mature leaf	4.067
	SRR3591708	Shoot apex	2.013
	SRR3591709	Stem	10.208
	SRR3591710	White floral bud	2.152
	SRR3591711	White flower	2.953
	SRR3591712	Green floral bud	0.964
	SRR3591713	Yellow flower	0.509
SRP173429	SRR8316895	Juvenile bud stage	2.894
	SRR8316896	Juvenile bud stage	2.163
	SRR8316897	Juvenile bud stage	2.334
	SRR8316894	Third green stage	1.605
	SRR8316900	Third green stage	2.508
	SRR8316901	Third green stage	1.361
	SRR8316898	Complete white stage	0.316
	SRR8316899	Complete white stage	6.311
	SRR8316903	Complete white stage	1.151
	SRR8316902	Silver flowering stage	1.035
	SRR8316904	Silver flowering stage	1.423
	SRR8316905	Silver flowering stage	0.497
	SRR8316906	Gold flowering stage	2.545
	SRR8316907	Gold flowering stage	2.017
	SRR8316908	Gold flowering stage	1.133
SRP132670	SRR6706286	Control	3.033
	SRR6706287	Light intensity 50%	2.007
	SRR6706288	Light intensity 20%	1.951
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.019
	CNS0095593	Slightly white alabastrum(diploid) 2	2.387
	CNS0095594	Slightly white alabastrum(diploid) 3	2.158
	CNS0095595	Whole white alabastrum(diploid) 2	2.661
	CNS0095596	Whole white alabastrum(diploid) 3	1.173
	CNS0095597	Whole white alabastrum(diploid) 4	2.021
	CNS0095598	Silvery flower (diploied) 1	13.024
	CNS0095599	Silvery flower (diploied) 2	9.801
	CNS0095600	Silvery flower (diploied) 3	5.612
	CNS0095601	Golden flower (diploid) 1	13.832
	CNS0095602	Golden flower (diploid) 2	9.496
	CNS0095603	Golden flower (diploid) 3	10.043
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.992
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.919
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.788
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.087
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.615
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.035
	CNS0095610	Silvery flower (tetraploid) 1	3.704
	CNS0095611	Silvery flower (tetraploid) 2	3.883
	CNS0095612	Silvery flower (tetraploid) 3	2.050
	CNS0095613	Golden flower (tetraploid) 1	1.079
	CNS0095614	Golden flower (tetraploid) 2	1.500
	CNS0095615	Golden flower (tetraploid) 3	0.838
CRA001975	CRR073297	Stem 1	3.650
	CRR073298	Stem 2	2.686
	CRR073299	Stem 3	2.955
	CRR073300	Leaf 1	1.819
	CRR073301	Leaf 2	2.425
	CRR073302	Leaf 3	2.503
	CRR073303	Juvenile bud 1	2.009
	CRR073304	Juvenile bud 2	1.725
	CRR073305	Juvenile bud 3	3.305
	CRR073306	Third green 1	0.604
	CRR073307	Third green 2	0.448
	CRR073308	Third green 3	1.074
	CRR073309	Second white 1	0.927
	CRR073310	Second white 2	0.829
	CRR073311	Second white 3	0.271
	CRR073312	Silver flowering 1	0.632
	CRR073313	Silver flowering 2	0.191
	CRR073314	Silver flowering 3	0.245
	CRR073315	Gold flowering 1	15.380
	CRR073316	Gold flowering 2	24.129
	CRR073317	Gold flowering 3	25.882
	CRR073318	Tawny withering 1	4.960
	CRR073319	Tawny withering 2	4.039
	CRR073320	Tawny withering 3	5.379