Gene detail

Detail information of GWHGAAZE018046

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_004236093.1	6.3719E-159	PREDICTED: enolase 1, chloroplastic [Solanum lycopersicum]
Swissprot	tr\|Q9C9C4\|ENO1_ARATH	5E-153	Enolase 1, chloroplastic (Precursor)
trEMBL	tr\|K4BKV2\|K4BKV2_SOLLC	2E-159	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc03g114500.2.1}
TAIR10	AT1G74030.1	2E-124	enolase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	14074305	14076689	-
GWHAAZE00000005	mRNA	14074305	14076689	-
GWHAAZE00000005	exon	14074305	14074447	-
GWHAAZE00000005	exon	14074655	14074976	-
GWHAAZE00000005	exon	14075060	14075064	-
GWHAAZE00000005	exon	14075364	14075717	-
GWHAAZE00000005	exon	14075972	14076014	-
GWHAAZE00000005	exon	14076597	14076689	-
GWHAAZE00000005	CDS	14076597	14076689	-
GWHAAZE00000005	CDS	14075972	14076014	-
GWHAAZE00000005	CDS	14075364	14075717	-
GWHAAZE00000005	CDS	14075060	14075064	-
GWHAAZE00000005	CDS	14074655	14074976	-
GWHAAZE00000005	CDS	14074305	14074447	-

Transcript Sequence
>GWHTAAZE018068 ATGACTTGTACCGATCGGCCGTGCCAAGTGGCGCATCCAGAGGGATCTATGAGGCATTGGAGCTCAGAGACGGTGATAACAGCGTTTATGGAGGTGCATTTTGAATCATCAAACATTTGGACTAAGCCGATATCAGTTACTTGTTATTGTTTTGACACTTCATCCTTATATTCTATACAAAGGAATCAAGCTGATTTTGATGCAATTATGCTGGAGATTGATGGAACTCCAAACAAGTCGAAACTGGGGGCTAATGCAATACTTGGAGTATCTCTAAGTGTATGTCGAGCTGGTGCAGGAGCAAAGAGAATACCCCTTTACAAGCACATTCAAGAAATATCCGGAACAAAGGAGCTTGTTATGCCAGTTCCTGCATTCAATGTGATCAATGGAGGCAGCCATGCTGGAAATAATCTGGCCATGCAAGAATTCATGATACTGCCAGTTGGTGCAAACTCATTCACCAAGGCCCTTCGCATGGGAAGTGAAGGCAAGATCAAAATTGGAATGGATGTTGCGGCTTCAGAGTTCTTGACAAAAAATGGGAAATATGATCTCAATTTTAAGAAACAACCAAATGATGGTGCTCATGTACTCACAGCTCAGAGTCTTTGTGAACTTTACGAAGAGTTTGTCAAAGATTTCCCGATTGTGTCAATTGAAGATCCCTTTGACCAAGACGATTGGAGCTCGTGGACTTCCTTGCAATCATCTGTCGACATGCAACTTGTAGGCGATGATTTGTTGGTCACAAATCCTGAGAAGATAACCGAAGCTATCCAAAAGAAGGCTTGCAATGGGTTGTTATTGAAGGCAAGCACAGTAACTGAATCCATTCAAGCAGCTCTTGACTCAAAACCTGCAGGGTGGGGTGTGATGGTTAGCCACCGTAGCGGTGAAACAGAGGATACCTTCATTGCAGATCTTTCCGTTGGATTGGCTAGTGGACAGGTTTTATAA

Network for GWHGAAZE018046

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03952.17	Enolase_N	61	110	3.10E-18
PF00113.23	Enolase_C	161	318	7.00E-65

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01689	ENO, eno	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Methane metabolism	map00680
		RNA degradation	map03018
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0000015	cellular_component	phosphopyruvate hydratase complex
GO:0000287	molecular_function	magnesium ion binding
GO:0004634	molecular_function	phosphopyruvate hydratase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.062
	SRR3591706	second leaf	2.848
	SRR3591707	mature leaf	6.695
	SRR3591708	Shoot apex	8.785
	SRR3591709	Stem	12.978
	SRR3591710	White floral bud	12.132
	SRR3591711	White flower	11.018
	SRR3591712	Green floral bud	13.113
	SRR3591713	Yellow flower	7.841
SRP173429	SRR8316895	Juvenile bud stage	1.736
	SRR8316896	Juvenile bud stage	2.728
	SRR8316897	Juvenile bud stage	1.404
	SRR8316894	Third green stage	1.228
	SRR8316900	Third green stage	1.912
	SRR8316901	Third green stage	1.556
	SRR8316898	Complete white stage	0.740
	SRR8316899	Complete white stage	2.362
	SRR8316903	Complete white stage	1.453
	SRR8316902	Silver flowering stage	0.165
	SRR8316904	Silver flowering stage	0.533
	SRR8316905	Silver flowering stage	0.022
	SRR8316906	Gold flowering stage	0.195
	SRR8316907	Gold flowering stage	0.400
	SRR8316908	Gold flowering stage	0.384
SRP132670	SRR6706286	Control	2.523
	SRR6706287	Light intensity 50%	2.602
	SRR6706288	Light intensity 20%	2.249
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.356
	CNS0095593	Slightly white alabastrum(diploid) 2	2.264
	CNS0095594	Slightly white alabastrum(diploid) 3	2.750
	CNS0095595	Whole white alabastrum(diploid) 2	2.482
	CNS0095596	Whole white alabastrum(diploid) 3	2.448
	CNS0095597	Whole white alabastrum(diploid) 4	1.814
	CNS0095598	Silvery flower (diploied) 1	3.955
	CNS0095599	Silvery flower (diploied) 2	4.143
	CNS0095600	Silvery flower (diploied) 3	1.321
	CNS0095601	Golden flower (diploid) 1	4.228
	CNS0095602	Golden flower (diploid) 2	1.162
	CNS0095603	Golden flower (diploid) 3	1.672
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.750
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.402
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.208
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.290
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.160
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.785
	CNS0095610	Silvery flower (tetraploid) 1	1.127
	CNS0095611	Silvery flower (tetraploid) 2	1.788
	CNS0095612	Silvery flower (tetraploid) 3	0.469
	CNS0095613	Golden flower (tetraploid) 1	0.396
	CNS0095614	Golden flower (tetraploid) 2	0.557
	CNS0095615	Golden flower (tetraploid) 3	0.096
CRA001975	CRR073297	Stem 1	1.620
	CRR073298	Stem 2	2.136
	CRR073299	Stem 3	0.315
	CRR073300	Leaf 1	1.767
	CRR073301	Leaf 2	2.064
	CRR073302	Leaf 3	1.002
	CRR073303	Juvenile bud 1	0.702
	CRR073304	Juvenile bud 2	0.467
	CRR073305	Juvenile bud 3	0.723
	CRR073306	Third green 1	0.212
	CRR073307	Third green 2	0.036
	CRR073308	Third green 3	0.390
	CRR073309	Second white 1	0.099
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.329
	CRR073316	Gold flowering 2	0.284
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.703
	CRR073319	Tawny withering 2	1.930
	CRR073320	Tawny withering 3	2.323