Detail information of GWHGAAZE018063


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAX45156.11.13388E-67CYCLOIDEA-like [Lonicera heteroloba]
Swissprottr|Q9AT84|TB1_MAIZE3E-18Transcription factor TEOSINTE BRANCHED 1
trEMBLtr|Q2TKW8|Q2TKW8_9DIPS4E-68CYCLOIDEA-like {ECO:0000313|EMBL:AAX45156.1} (Fragment)
TAIR10AT1G68800.14E-12TCP domain protein 12

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1452302614523838-
GWHAAZE00000005mRNA1452302614523838-
GWHAAZE00000005exon1452319714523838-
GWHAAZE00000005exon1452302614523082-
GWHAAZE00000005CDS1452319714523838-
GWHAAZE00000005CDS1452302614523082-
Transcript Sequence

Network for GWHGAAZE018063

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP11353.60E-31
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.633
SRR3591706second leaf2.370
SRR3591707mature leaf2.769
SRR3591708Shoot apex4.083
SRR3591709Stem2.520
SRR3591710White floral bud9.175
SRR3591711White flower45.122
SRR3591712Green floral bud1.160
SRR3591713Yellow flower22.896
SRP173429 SRR8316895Juvenile bud stage 0.028
SRR8316896Juvenile bud stage 0.068
SRR8316897Juvenile bud stage 0.338
SRR8316894Third green stage 0.291
SRR8316900Third green stage 0.335
SRR8316901Third green stage 0.196
SRR8316898Complete white stage 4.777
SRR8316899Complete white stage 6.225
SRR8316903Complete white stage 10.952
SRR8316902Silver flowering stage6.863
SRR8316904Silver flowering stage11.111
SRR8316905Silver flowering stage5.447
SRR8316906Gold flowering stage 10.193
SRR8316907Gold flowering stage 20.829
SRR8316908Gold flowering stage 15.747
SRP132670SRR6706286Control1.909
SRR6706287Light intensity 50%1.398
SRR6706288Light intensity 20%1.067
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.896
CNS0095593Slightly white alabastrum(diploid) 20.402
CNS0095594Slightly white alabastrum(diploid) 30.317
CNS0095595Whole white alabastrum(diploid) 20.299
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.724
CNS0095598Silvery flower (diploied) 113.039
CNS0095599Silvery flower (diploied) 211.339
CNS0095600Silvery flower (diploied) 326.460
CNS0095601Golden flower (diploid) 18.528
CNS0095602Golden flower (diploid) 220.406
CNS0095603Golden flower (diploid) 320.637
CNS0095604Slightly white alabastrum(tetraploid) 10.190
CNS0095605Slightly white alabastrum(tetraploid) 20.255
CNS0095606Slightly white alabastrum(tetraploid) 31.007
CNS0095607Whole white alabastrum(tetraploid) 10.382
CNS0095608Whole white alabastrum(tetraploid) 20.326
CNS0095609Whole white alabastrum(tetraploid) 30.059
CNS0095610Silvery flower (tetraploid) 128.861
CNS0095611Silvery flower (tetraploid) 212.805
CNS0095612Silvery flower (tetraploid) 34.540
CNS0095613Golden flower (tetraploid) 129.871
CNS0095614Golden flower (tetraploid) 239.368
CNS0095615Golden flower (tetraploid) 310.489
CRA001975CRR073297Stem 11.068
CRR073298Stem 20.564
CRR073299Stem 30.880
CRR073300Leaf 11.921
CRR073301Leaf 21.762
CRR073302Leaf 30.967
CRR073303Juvenile bud 17.285
CRR073304Juvenile bud 23.831
CRR073305Juvenile bud 313.760
CRR073306Third green 15.784
CRR073307Third green 27.393
CRR073308Third green 313.184
CRR073309Second white 13.239
CRR073310Second white 24.197
CRR073311Second white 33.324
CRR073312Silver flowering 11.468
CRR073313Silver flowering 21.423
CRR073314Silver flowering 31.895
CRR073315Gold flowering 10.438
CRR073316Gold flowering 20.885
CRR073317Gold flowering 30.838
CRR073318Tawny withering 118.664
CRR073319Tawny withering 25.001
CRR073320Tawny withering 312.584