Detail information of GWHGAAZE018099


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrBAF02189.11.08057E-31putative zinc finger protein [Arabidopsis thaliana]
trEMBLtr|M0TVC1|M0TVC1_MUSAM2E-33Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P31690_001}
TAIR10AT3G18290.12E-29zinc finger protein-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1507136815071722-
GWHAAZE00000005mRNA1507136815071722-
GWHAAZE00000005exon1507136815071520-
GWHAAZE00000005exon1507163615071722-
GWHAAZE00000005CDS1507163615071722-
GWHAAZE00000005CDS1507136815071520-
Transcript Sequence

Network for GWHGAAZE018099

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14599.7zinc_ribbon_65602.60E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.939
SRR3591706second leaf10.864
SRR3591707mature leaf12.924
SRR3591708Shoot apex14.210
SRR3591709Stem17.920
SRR3591710White floral bud12.612
SRR3591711White flower20.114
SRR3591712Green floral bud16.183
SRR3591713Yellow flower19.685
SRP173429 SRR8316895Juvenile bud stage 8.173
SRR8316896Juvenile bud stage 11.838
SRR8316897Juvenile bud stage 3.211
SRR8316894Third green stage 3.618
SRR8316900Third green stage 11.614
SRR8316901Third green stage 15.575
SRR8316898Complete white stage 4.626
SRR8316899Complete white stage 16.684
SRR8316903Complete white stage 6.897
SRR8316902Silver flowering stage8.621
SRR8316904Silver flowering stage8.803
SRR8316905Silver flowering stage3.246
SRR8316906Gold flowering stage 12.715
SRR8316907Gold flowering stage 15.179
SRR8316908Gold flowering stage 13.639
SRP132670SRR6706286Control7.763
SRR6706287Light intensity 50%9.467
SRR6706288Light intensity 20%9.311
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.859
CNS0095593Slightly white alabastrum(diploid) 218.097
CNS0095594Slightly white alabastrum(diploid) 327.660
CNS0095595Whole white alabastrum(diploid) 219.946
CNS0095596Whole white alabastrum(diploid) 320.405
CNS0095597Whole white alabastrum(diploid) 421.589
CNS0095598Silvery flower (diploied) 115.626
CNS0095599Silvery flower (diploied) 217.237
CNS0095600Silvery flower (diploied) 311.181
CNS0095601Golden flower (diploid) 120.560
CNS0095602Golden flower (diploid) 216.892
CNS0095603Golden flower (diploid) 312.576
CNS0095604Slightly white alabastrum(tetraploid) 121.906
CNS0095605Slightly white alabastrum(tetraploid) 219.734
CNS0095606Slightly white alabastrum(tetraploid) 315.611
CNS0095607Whole white alabastrum(tetraploid) 123.347
CNS0095608Whole white alabastrum(tetraploid) 225.604
CNS0095609Whole white alabastrum(tetraploid) 319.972
CNS0095610Silvery flower (tetraploid) 123.677
CNS0095611Silvery flower (tetraploid) 215.107
CNS0095612Silvery flower (tetraploid) 316.921
CNS0095613Golden flower (tetraploid) 120.120
CNS0095614Golden flower (tetraploid) 217.954
CNS0095615Golden flower (tetraploid) 325.747
CRA001975CRR073297Stem 114.579
CRR073298Stem 210.024
CRR073299Stem 310.279
CRR073300Leaf 116.994
CRR073301Leaf 28.968
CRR073302Leaf 37.852
CRR073303Juvenile bud 110.980
CRR073304Juvenile bud 24.460
CRR073305Juvenile bud 310.263
CRR073306Third green 12.865
CRR073307Third green 22.778
CRR073308Third green 34.330
CRR073309Second white 10.808
CRR073310Second white 23.983
CRR073311Second white 33.365
CRR073312Silver flowering 14.353
CRR073313Silver flowering 24.316
CRR073314Silver flowering 32.389
CRR073315Gold flowering 19.939
CRR073316Gold flowering 211.094
CRR073317Gold flowering 36.799
CRR073318Tawny withering 112.781
CRR073319Tawny withering 212.014
CRR073320Tawny withering 37.364